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SCNpilot_expt_1000_bf_scaffold_10030_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1717..2544)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRE6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 275.0
  • Bit_score: 519
  • Evalue 2.20e-144
  • rbh
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 275.0
  • Bit_score: 519
  • Evalue 3.10e-144
murC; UDP-N-acetylmuramate-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 273.0
  • Bit_score: 468
  • Evalue 1.40e-129
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GTGCGCGCGGCCTTCCGCCAGTTCGTCGAGAACGTGCCGTTCTACGGCTTCGGCGTCATGTGCCTCGACCATCCCGAAGTGCAGTCGATGGTCAGCCGCATCGAGGACCGCAAGGTCATCACCTATGGCGAGAACCCGCAGGCGGACGTGCGCTTTTCCAATATCCGCATGGACGGCGCGACCTCGGTCTTCGACGTGGAAATCCGCCGCCGCCGCACCGGCCAGGTGATCTCGCTGAAGGACCTGCGCCTGCCCATGCCGGGCCGCCACAACGTTTCCAACGCCACGGCGGCCATCGCCGTCGCCCAGCGCCTCGGCATTGCGCCGGAGGCGATCGCCAGGGGGCTGGCGGGCTTCGGGGGCGTCAAGCGCCGCTTCACCTTCACCGGAAGCTGGAACGGCGTGAACGTCTATGACGACTACGGCCACCACCCGGTGGAGATCAAGGCCGTGCTGCGCGCGGCGCGCGAAGCGTGCTCCGGCCGCATCATCGCCGTGCACCAGCCGCACCGCTACAGCCGCGTGGCGAGCCTCTTCGAGGAGTTCGCCGGCTGCTTCAACGATGCCGACACGGTCATGATCGCGCCGGTCTACGCGGCTGGCGAGGACCCGATCGAGGGCGTGTCGTCGGAAGAGATGGTTTCCCGCATCAAGTCCGCCGGGCACCGCGATGCGCGGTTCCTCGCCTCGCCGGAGGCGCTGGCGTCCATCGTGGCCGGCATTGCAAAGCCGGGCGACTTTGTGGTTCTCTTGGGGGCTGGAAACATCACGTACTGGGCGCAGACGCTGCCCAAGGAACTGACAGGCATTTCGGGTGAGGTGGCATGA
PROTEIN sequence
Length: 276
VRAAFRQFVENVPFYGFGVMCLDHPEVQSMVSRIEDRKVITYGENPQADVRFSNIRMDGATSVFDVEIRRRRTGQVISLKDLRLPMPGRHNVSNATAAIAVAQRLGIAPEAIARGLAGFGGVKRRFTFTGSWNGVNVYDDYGHHPVEIKAVLRAAREACSGRIIAVHQPHRYSRVASLFEEFAGCFNDADTVMIAPVYAAGEDPIEGVSSEEMVSRIKSAGHRDARFLASPEALASIVAGIAKPGDFVVLLGAGNITYWAQTLPKELTGISGEVA*