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SCNpilot_expt_1000_bf_scaffold_7912_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 4297..5238

Top 3 Functional Annotations

Value Algorithm Source
RepB plasmid partition n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UH76_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 314.0
  • Bit_score: 520
  • Evalue 8.80e-145
  • rbh
RepB plasmid partition {ECO:0000313|EMBL:EGP53945.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 314.0
  • Bit_score: 520
  • Evalue 1.20e-144
RepB plasmid partition similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 249.0
  • Bit_score: 433
  • Evalue 5.80e-119
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGCATGATGGGCGGAAAGACGACAGCGATGGGGATGGGCGAATTCACCTCGCTTTCGATCGTGACATAAGGGCCATTCCCATTTCCGCGATCATTCCCCTTAAATCGCTCCCGGACGGCGCTCGCGAAAGCAGGAAGTTCGCGCAGGTTCTAAGCTCGATAAAGGCTATCGGCCTGGTAGAGGCGCCTGTCGTCATCGTAAACACACAGAATGCCGGGACCTGGTTTCTGCTCGATGGACATCTACGGCTGGAAGCACTTAAGCAACTCGGCATTGCGGAGGTCGAGTGCCTGATCGCCACCGACGACGACACCTATACCTATAACAAGCGGGTCAACCGGCTGGCGCCGATCCAGGAGCACAGGATGATAGCGCGCGCCATCGAACGCGGCGTTTCCTCTGCTGACATAGCCGATGCGTTGGGCCTTCAGGTGGAGTCCGTCATTCGCCGCTTTCGGTTGCTGGAAGGTATCAGTCCCGAAGCGGCCGAGATGCTGAAAGATACGCCGTGCTCGATGAAGGTGTTCGATGTTTTGCGGCAAATGTCCGCCGTTCGCCAGATCGAGGCGGCAGATCTGATGATAGGTCAGCACAATTTTACCGTCATGTTCGCCCGAGCGATTCGCGCTGCCACGCCTGACAGCCAACTGGTAACGGCCAAGAAAGTGACAGGCGCGGCTGCGGGCACGCCATCAGGTCAGCAGATTGCCCGTATGGAACGCGAACTGGCCGCACTGCAGACGCAAGTGAAAAGCGTCGAGGAAACCTATGGCATCGACAATCTGCACCTCACCGTGGCACGCGGATATGTCGCCAGGCTACTTGCGAACGGTCGGATCAGCCGTTGGCTTTCGAACCACCGCCAGGAATATCTCGGGGAATTTCAAAAGATTGCCGAGATCGAGGCGATCAGCCCTCAGTCCGAGGCTACGGAGCCATAG
PROTEIN sequence
Length: 314
MHDGRKDDSDGDGRIHLAFDRDIRAIPISAIIPLKSLPDGARESRKFAQVLSSIKAIGLVEAPVVIVNTQNAGTWFLLDGHLRLEALKQLGIAEVECLIATDDDTYTYNKRVNRLAPIQEHRMIARAIERGVSSADIADALGLQVESVIRRFRLLEGISPEAAEMLKDTPCSMKVFDVLRQMSAVRQIEAADLMIGQHNFTVMFARAIRAATPDSQLVTAKKVTGAAAGTPSGQQIARMERELAALQTQVKSVEETYGIDNLHLTVARGYVARLLANGRISRWLSNHRQEYLGEFQKIAEIEAISPQSEATEP*