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SCNpilot_expt_1000_bf_scaffold_11319_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1477..2760

Top 3 Functional Annotations

Value Algorithm Source
Carboxy-terminal-processing protease CtpA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDC9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 427.0
  • Bit_score: 779
  • Evalue 1.90e-222
  • rbh
Carboxy-terminal-processing protease CtpA {ECO:0000313|EMBL:EYR81977.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EYR81977.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 427.0
  • Bit_score: 779
  • Evalue 2.60e-222
ctpA; carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 427.0
  • Bit_score: 717
  • Evalue 2.70e-204
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGGGTGCCACGGCCATGAGCGTCATCAACACGGTAACGCTGCCCGCCGAAGCCGCCGGCTCGTCGACCTATCGCGAGCTTTCCATCTTCGGCGACGTGTTCGAACGCGTGCGCGCGCAATATGTGACGCCGCCGAAGGAAGACCAGCTCATCGAGAATGCCATCAACGGCATGCTCACCTCGCTCGACCCGCATTCATCCTACATGAATTCGAAGGACGCCGAGGACATGCGCACGCAGACGCGCGGCGAATTCGGCGGCCTCGGCATCGAGGTCACGATGGAGGACGAGCTCGTCAAGGTCATCACGCCGATCGACGACACGCCCGCCGCCCGCGCCGGCGTCCTTGCCGGTGACTTCATCTCCAAGATCGACGGCCAGGACGTTCGCGGCCTGAAGCTGGAAGAAGCGGTCGAGAAGATGCGCGGCGCCGTCAACACGCCGATCAAGCTGACGCTGCTCCGCAAGGGCGCCGACAAGCCGATCGAGTTGACCATCATGCGCGACATCATCGCCGTGAAGGCCGTGAAGTTCCGCGTGGAGAACGATGTCGGCTACCTGCGCGTCATCTCCTTCACCGACAAGACCACAGACGACCTCGAAAGCGCCATCGCCAAGATCAAGGAAGACGTCCCGGCCGACAAGCTGAAGGGCTATGTCCTCGACCTGCGCCTCAATCCAGGCGGCCTGCTCGACCAGGCGATCAACGTCTCCGACACCTTCCTCGAGCGCGGCGAGGTCGTTTCGACGCGCGGCCGCGACGAGGCGGATACCCGCCGCTTCAACGCGACGCCCGGCGACCTCACCGACGGCAAGCCGGTCGTCGTCATGATCAACGGCGGCTCGGCCTCGGCCTCGGAAATCGTCGCCGGCGCGCTGCAGGACCTGCGCCGCGCCACGGTGATCGGCACGCGTTCCTTCGGCAAGGGCTCCGTCCAGACCATCATCCCGATGGGCGATGCCGGCGCGCTGCGCCTGACGACGGCGCTCTACTACACGCCGTCCGGCAAATCGATCCAGGGCACCGGCATCACGCCCGACATCACCGTCGAGCAGCCGCTGCCGGCCGAACTGCAGGGCAAGGTCGAGAACGCCAGCGAATCGAGCCTGCGCGGCCACATCCAGGGCCAGAGCGAGACGGAAACGGGTTCCGGTTCGTCCGCCTATGTCCCGCCGGAGCCGAAGGACGACCTGCAGCTTCAATACGCGCTGGAACTCCTGCGCGGCCAGAAGACCGACCCGTCCTTCCCGGCCAATCCGGAAAAGGCCGAGCTGAAGAACTAA
PROTEIN sequence
Length: 428
MGATAMSVINTVTLPAEAAGSSTYRELSIFGDVFERVRAQYVTPPKEDQLIENAINGMLTSLDPHSSYMNSKDAEDMRTQTRGEFGGLGIEVTMEDELVKVITPIDDTPAARAGVLAGDFISKIDGQDVRGLKLEEAVEKMRGAVNTPIKLTLLRKGADKPIELTIMRDIIAVKAVKFRVENDVGYLRVISFTDKTTDDLESAIAKIKEDVPADKLKGYVLDLRLNPGGLLDQAINVSDTFLERGEVVSTRGRDEADTRRFNATPGDLTDGKPVVVMINGGSASASEIVAGALQDLRRATVIGTRSFGKGSVQTIIPMGDAGALRLTTALYYTPSGKSIQGTGITPDITVEQPLPAELQGKVENASESSLRGHIQGQSETETGSGSSAYVPPEPKDDLQLQYALELLRGQKTDPSFPANPEKAELKN*