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SCNpilot_expt_1000_bf_scaffold_5964_curated_18

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 14721..15632

Top 3 Functional Annotations

Value Algorithm Source
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 303.0
  • Bit_score: 588
  • Evalue 4.70e-165
Ornithine carbamoyltransferase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XQF6_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 301.0
  • Bit_score: 531
  • Evalue 6.30e-148
  • rbh
argF; ornithine carbamoyltransferase (OTCase) (EC:2.1.3.3) similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 301.0
  • Bit_score: 530
  • Evalue 2.60e-148
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCCAAGCATTTTCTCGATCTTTCCGCCGTTTCGGAAAGCGATCTCCGCGTCATCATGGACGACGCGCACAGCCGCAAGGCCACCAGCAAGGCCGGCACGGAGGCAAAGCCGCTCGCCGGCAAGATGCTGGCGATGATCTTCGAGAAGCCCTCCACCCGAACCCGCGTCTCCTTCGACGTCGGCATGCGCCAGCTCGGCGGCGAGACGCTGTTCCTGTCGGGCACGGAAATGCAGCTCGGCCGCGCCGAGACCATCGGCGACACGGCCAAGGTCCTGTCGCGCTATGTCGATGCCATCATGATCCGCACGACCGACCATGCGCGCCTGCTGGAGCTTGCCGAGCACGCCACCGTGCCTGTCATCAACGCCCTGACGGACCTCACCCATCCCTGCCAGATCATGGCCGACATCATGACCTTCGAGGAGCATCGCGGCCCGGCCAAGGGCAAGACCTTCTCCTGGATGGGCGACGGCAACAACGTGCTGCACTCCTTCGTCGAGGGCGCGGCCCGCTTCGGCTACACGATGAAGATGGCCGTGCCGATGGGCTCCGAGCCGGACGACAAGATCCTCAACTGGGCGCGCGACAACGGCGGCAACATCCTGCTCGGCCACGACCCGGACGCCATCGCCGACGGCGCCGACCTCATCGTCACCGACTGCTGGGTCTCCATGAACCAGGAGCACCGCGCTCGCGGCCACAACATCTTCCAGCCCTACCAGGTCAACAAGCAGCTCATGGCGCGCGCCGGCAAGGATGCGCTCTTCATGCACTGCCTGCCCGCCCATCGCGGCGAGGAAGTGACCGACGAGGTGATCGACGGCCCGCAGTCCGTGGTCTTCGACGAGGCGGAGAACCGCCTGCACGCGCAGAAGTCGATCCTTGCCTGGTGCTTCGGCGCCGTCTGA
PROTEIN sequence
Length: 304
MAKHFLDLSAVSESDLRVIMDDAHSRKATSKAGTEAKPLAGKMLAMIFEKPSTRTRVSFDVGMRQLGGETLFLSGTEMQLGRAETIGDTAKVLSRYVDAIMIRTTDHARLLELAEHATVPVINALTDLTHPCQIMADIMTFEEHRGPAKGKTFSWMGDGNNVLHSFVEGAARFGYTMKMAVPMGSEPDDKILNWARDNGGNILLGHDPDAIADGADLIVTDCWVSMNQEHRARGHNIFQPYQVNKQLMARAGKDALFMHCLPAHRGEEVTDEVIDGPQSVVFDEAENRLHAQKSILAWCFGAV*