ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11850_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2266..2952)

Top 3 Functional Annotations

Value Algorithm Source
Putative ATP-binding component of ABC transporter {ECO:0000313|EMBL:AHK45985.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 228.0
  • Bit_score: 410
  • Evalue 2.20e-111
ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000373D00A similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 228.0
  • Bit_score: 399
  • Evalue 2.10e-108
  • rbh
livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF (LIV-I protein F); K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 226.0
  • Bit_score: 302
  • Evalue 1.50e-79
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGAGCCTCCTCGAAATCAAGGGCCTCGAAACGTTCTACGGCGCCTCGCAGGCGCTCTTCGGCGTCGATCTCGATGTGCGCGAAGGCGAGGTGGTCGCCCTCATGGGGCGCAACGGCATGGGCAAGACGACGACGATCAACTCGATCATCGGCCTCCTGCGCCCGCGCGCCGGCTCCATCGGCTTTTCGGGCCGGGCGATCGCCGGCATGCGGCCGCACCGTATCGCACGGCTCGGCCTCGGCCTCGTTCCCGAGGGGCGGCGCTGCTTCCCCAACCTGACGGTTCTGGAGAACCTCGTGGCCACGGCCCGCGGCAGCGAGTGGACCTTCGGCAAGGTCGTCGATCTTTTCCCGCGCCTCGGCGAGCGGCGCGACCAGTATGCCAGCACGCTCTCGGGCGGCGAGCAGCAGATGCTCGCCATCGGCCGCGCGCTGATGACCAATCCCCGCCTGCTCGTGCTCGACGAGGCGACGGAAGGCCTTGCCCCGGTGATCCGGCAGGACATCTGGTCGGCGATTCGCACGCTGAAGGCGGCCGGCCAGTCGATCCTCGTCGTCGACAAGACGCTCTCGGAACTCCTGCCCGTGGCCGACCGGTGCTTCGTGCTGGAGAAGGGCGCGACGGTCTTCGAAGGCCCGCCGGCGGCGCTGACGCCGGCGCTGCAGGACCGCTATCTCGGCGTCTGA
PROTEIN sequence
Length: 229
MSLLEIKGLETFYGASQALFGVDLDVREGEVVALMGRNGMGKTTTINSIIGLLRPRAGSIGFSGRAIAGMRPHRIARLGLGLVPEGRRCFPNLTVLENLVATARGSEWTFGKVVDLFPRLGERRDQYASTLSGGEQQMLAIGRALMTNPRLLVLDEATEGLAPVIRQDIWSAIRTLKAAGQSILVVDKTLSELLPVADRCFVLEKGATVFEGPPAALTPALQDRYLGV*