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SCNpilot_expt_1000_bf_scaffold_11850_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2949..3164)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP74281.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 71.0
  • Bit_score: 134
  • Evalue 5.70e-29
ABC transporter related protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNR8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 69.0
  • Bit_score: 125
  • Evalue 2.50e-26
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 71.0
  • Bit_score: 114
  • Evalue 1.80e-23

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGGGCCAGAAGGCTCCCGGCAACTGACGTCGTTCCTCGACGGCCTGCGCCACGAGGCGCCGATGCTGCTGGTCGAGCACGACATGGACGCGGTCTTCGCGCTGGCCGACCGCGTCTCCGTCCTCGTCTACGGCCGGATCATCGCGACGGGCACGGTGGACGAGATCCGCCGCGATCCCGACGTGCGCCGCGCCTATCTCGGAGACGCCGCATGA
PROTEIN sequence
Length: 72
MGPEGSRQLTSFLDGLRHEAPMLLVEHDMDAVFALADRVSVLVYGRIIATGTVDEIRRDPDVRRAYLGDAA*