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SCNpilot_expt_1000_bf_scaffold_11850_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3662..4561)

Top 3 Functional Annotations

Value Algorithm Source
Putative permease component of ABC transporter {ECO:0000313|EMBL:AHK45983.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 299.0
  • Bit_score: 534
  • Evalue 1.30e-148
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI0003822F4E similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 298.0
  • Bit_score: 495
  • Evalue 3.80e-137
  • rbh
branched-chain amino acid transport system permease similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 296.0
  • Bit_score: 386
  • Evalue 7.80e-105
  • rbh

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGGCGAGCCCTTCTACGTGACGCTCGCCACCCGTGTCGCCGTACTCGCGCTCGCCGCTACCGGCCTCAACCTGGCGCTGGGCCTCGGTGGCCTGCTCTCCTTCGGGCATGCCGCCTTCTTCGGCCTCGGCGGCTATGCCGCGGGGATCCTGGCGACCCATGCCTTCAATGCCGAGCCGCTTGTCGCGGGCATTCCCGCAACGACGTCGATGCCGCTCATCTGGCTGGTCGCCGTCGCGGTCGCCGGGCTCGTCGCCCTGCCGATCGGCGCGATCAGCCTGCGCACGACAGGCGCCTACTTCATCATGATCACGCTCGCCTTCGCGCAGATGATCTATTATTTCGCGATCTCCTGGCCGGCCTATGGCGGCGAGGACGGCCTGTCGATCTATGTGCGCAATGCCTTTCCCGGCATCAATACGGCGCAGCCGCTGCCCTATTTCCTGGTCTGCTATGCCGTTCTCATGGCAATGCTCCTGCTGTTCCGCCTCGTCGCCGGCTCGCGCTTCGGCAGCGCGCTTGCGGCCGCACGGCAGAACGGCACGCGCCTTGCCGCCGTCGGCATCCAGCCCTTCCGCATCCGGCTCGTCGCCTTCATCCTTTCCGCCATGGTCACCGGGCTTGCCGGCGCGCTCTATGCCGACCTCAACCGGTTCGTCGGCCCGTCCATGCTGTCCTGGCACATGTCGGGCGAGCTCATCGTCCTCATCGTCCTCGGCGGCAAGGGCCGGCTCTTCGGGCCGGTCGCGGGGGCGATGATCTTCGTCTGCCTCGAATACGTTCTCGGCGGCATCACCGAGCGCTGGCAGTTCTTCCTCGGCCTCATCCTGCTCGGCATCGTGCTCTTCGCGCGCGGCGGGCTGCTCGGCCTCCTTTCGGGAAGGCCGCGCCATGTCTGA
PROTEIN sequence
Length: 300
MGEPFYVTLATRVAVLALAATGLNLALGLGGLLSFGHAAFFGLGGYAAGILATHAFNAEPLVAGIPATTSMPLIWLVAVAVAGLVALPIGAISLRTTGAYFIMITLAFAQMIYYFAISWPAYGGEDGLSIYVRNAFPGINTAQPLPYFLVCYAVLMAMLLLFRLVAGSRFGSALAAARQNGTRLAAVGIQPFRIRLVAFILSAMVTGLAGALYADLNRFVGPSMLSWHMSGELIVLIVLGGKGRLFGPVAGAMIFVCLEYVLGGITERWQFFLGLILLGIVLFARGGLLGLLSGRPRHV*