ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11850_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4540..5535)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AHK45982.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 293.0
  • Bit_score: 532
  • Evalue 5.60e-148
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI0003748BA4 similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 293.0
  • Bit_score: 494
  • Evalue 9.30e-137
  • rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 289.0
  • Bit_score: 435
  • Evalue 1.60e-119
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGTTCACCGCACTCCTGATCGAACAACTGCTCAACGGACTTCAGCTCGGCGTGATGCTGTTTCTGATGGCCGCCGGCCTGACGCTGATCTTCGGCGTCATGGGCCTCATCAACCTCGCGCACGGTTCGCTCTACATGGTCGGCGCCTTCGCCTGCGCGACGGTCGCGGCGGCCACCGGTTCCTTCTGGCTGGGCCTCATTGCCAGCCTCACGGCCGCCGCCGGCGTCGGCGCGCTCATCGAGGTCGCCGTCATCCGCCGGCTCTACGACCGCGACCATCTCGACCAGGTGCTCGCCACCTTCGCCCTGATCCTGATCCTGTCGGAAGGCACGCGCTGGCTCTTCGGCTCCTTTCCACTCTATCTCGACATTCCAAGGCAGCTCCAGGGGGCGGTGCCGCTGCCGGGCGGCGGCCGGTACCAGCTCTACCGGCTGGCGATCATCGCCGTCGGCATCGCGGTCGCCGCCGGGCTCTATCTCCTCATTTCCCGGACCCGGCTCGGCATGCGCATCCGCGCGGGCGAATCCGACCGCGAGATGATCGCCGCCCTCGGCGTCGACATCGGCACGCTCTATACCGTCGTCTTCGCGCTCGGCGCGGCGCTGGCGGGCCTTGCCGGCGCCCTCGTCGGCGCGCTCCAGTCGGTGCAGGTCGGCATGGGCGAGCCGGTGCTGATCCTCGCCTTCGTCGTCATCGTGATCGGCGGCATCGGCTCCATCAAGGGCGCCCTTGTCGGCGCCGTCATCGTCGGCGTCGTCGACACGATGGGCCGCTTCCTGCTTCCCTCGCTGCTCGCGCTGACGATGCCGGCCTCGCAGGCCACGACGATCGGCGCGGCGCTTGCCTCGATGCTGATCTATGTCGTCATGGCCCTCATCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTCATGCTCGCCCTCCTTCTCCTCGGCTTTCCGCTCGTCGCGGCCGGCATGGGCGAGCCCTTCTACGTGA
PROTEIN sequence
Length: 332
VFTALLIEQLLNGLQLGVMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFACATVAAATGSFWLGLIASLTAAAGVGALIEVAVIRRLYDRDHLDQVLATFALILILSEGTRWLFGSFPLYLDIPRQLQGAVPLPGGGRYQLYRLAIIAVGIAVAAGLYLLISRTRLGMRIRAGESDREMIAALGVDIGTLYTVVFALGAALAGLAGALVGALQSVQVGMGEPVLILAFVVIVIGGIGSIKGALVGAVIVGVVDTMGRFLLPSLLALTMPASQATTIGAALASMLIYVVMALIXXXXXXXXXXXXXXXTSCSPSFSSAFRSSRPAWASPST*