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SCNpilot_expt_1000_bf_scaffold_11850_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6808..7638)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 276.0
  • Bit_score: 507
  • Evalue 1.20e-140
tryptophan 2,3-dioxygenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000366E3C5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 276.0
  • Bit_score: 478
  • Evalue 4.40e-132
  • rbh
tryptophan 2,3-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 276.0
  • Bit_score: 471
  • Evalue 1.70e-130
  • rbh

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
AAGCCCTACGACCCCTCGAAGGAAGGCGCGCAGATGTCGTTCGAGGGACGCATGTCCTATAGCGACTATCTCCGGCTGGAGACCGTCCTGACGACGCAGGCGCCGCTCTCGACGGCGCATGACGAGATGCTCTTCATCATCCAGCACCAGACGTCCGAACTCTGGATGAAGCTTGCCCTCCACGAGATCGAGGCGGCAATCCGCTCGATCCGGCAGGACAGGCTGGAGCCGGCCTTCAAGATGCTGACGCGGGTCGCCCGCATCTTCGAGCAGCTCAACAGCGCCTGGGACGTGCTGCGCACGATGACGCCGAGCGAATACACGCAGTTCCGCGAATCGCTCGGCCAGTCCTCGGGCTTCCAGTCCTGGCAGTACCGGGCGATCGAGTTCCTCGCCGGCAACCGGAACCTCGCCATGCTGCGCCCGCACGCGCACCGTCCCGACATCATGGAGAAGCTGGAGGCGATCCTTGCCGCTCCCTCCCTCTACGACGAGGCGATCCGGCTTCTGGCGCGCAGCGGCTTCGATGTCGGCGGCGAGGCGGAACGCGGCGACTGGCGCGAAACGCGCAGCGAGAACGACAAGGTCTTTTCCGCCTGGCAGGCCGTCTACCGCAATCCCGAACGCCACTGGATGCTCTACGAGCTTGCCGAGAAGCTGGTCGACTTCGAGGACTATTTCCGCCGGTGGCGGTTCAATCACGTCACCACCGTCGAGCGCATCATCGGCATGAAGCGCGGGACGGGCGGCACGTCGGGCGCATCCTATCTCAGGAAGATGCTGGAAGTGGAACTCTTCCCCGAGCTATGGCATGTACGTACAGACCTTTGA
PROTEIN sequence
Length: 277
KPYDPSKEGAQMSFEGRMSYSDYLRLETVLTTQAPLSTAHDEMLFIIQHQTSELWMKLALHEIEAAIRSIRQDRLEPAFKMLTRVARIFEQLNSAWDVLRTMTPSEYTQFRESLGQSSGFQSWQYRAIEFLAGNRNLAMLRPHAHRPDIMEKLEAILAAPSLYDEAIRLLARSGFDVGGEAERGDWRETRSENDKVFSAWQAVYRNPERHWMLYELAEKLVDFEDYFRRWRFNHVTTVERIIGMKRGTGGTSGASYLRKMLEVELFPELWHVRTDL*