ggKbase home page

scnpilot_solids1_trim150_scaffold_2734_1

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(1..2493)

Top 3 Functional Annotations

Value Algorithm Source
Dtr system oriT relaxase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037CDB8B similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 836.0
  • Bit_score: 1313
  • Evalue 0.0
Dtr system oriT relaxase {ECO:0000313|EMBL:KEA03061.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 836.0
  • Bit_score: 1315
  • Evalue 0.0
traA; putative conjugal transfer protein traA similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 827.0
  • Bit_score: 1297
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2493
GTGCCCGTCCCTCATTTCTCGGTCGGCATCGTCAGCCGCGGCGAAGGCCGCAGCGCCGTGCTGTCGGCCGCCTACCGGCATTGCGCGAAAATGGACTACGACCGGGAGGCGCGCACGGTCGATTATTCGGCCAAGCAGGGCCTCCTGCACGAGGAATTCCTGCTGCCGGCCGACGCGCCGCGATGGGCGCGGCTGCTGATCGCCGACCGCTCGGTGGCGGGCGCGGCCGGAGCCTTCTGGAACAGGATAGAGACCTTCGAGAAACGCTCGGACGCCCAGCTCGCCAAGGATGTCACCATAGCATTGCCGATCGAGCTTTCGGCCGACCGGAACATCGCGCTGGTGCGGGATTTCGTCGAGAGCCACATCCTGTCGAAAGGCATGGTCGCCGACTGGGTCTACCATGACAATCCCGGCAATCCGCATGTACATCTCATGATGACCTTGCGGCCGCTGACCGAAGACGGGTTCGGGCAGAAGAAGGTTTCGGTTCTTCGCCCCGACGGGCAGCCGCTGCGCAACGACGCCGGCAAAATCGTCTACGAACTTTGGGCCGGCGGCGCGGCGGAGTTTGGCGCGTTTCGCGACGGCTGGTTCGCCTGCCAGAACCGTCATCTGGCGCTTGCCGGTCTCGACATCCGCGTCGATGGTCGTTCCTACGAGAAGCAGGGGATCGAGCTTCAACCGACCATCCATCTCGGCGTCGGAACCAAGGCGATCGAACGCAAGGCGGCGGGCAAGAAATGGTCGCCACGGCTTGAACGCGTCGCATTGCAGGAAGAGCGCCGCGTCGAGAATGCGCGCCGTATCGAGCGCCGGCCGGAGATCGTGCTGGACATCATCACCCGCGAGAAAAGCGTCTTCGACGAGCGCGACATCGCCAAAATCCTGCACCGCTATGTCGATGACGCAACGCTGTTCCGGCAGCTGATGGCGCGCATCCTGCAGAGCCCCGCCGTGCTGCGGCTGGAGCGCGAGACGGTCGAGTTCGCGAGCGGCGCCCGCGTCCCGTCGAAATACACGACGCGCGAGCTGATCCGGCTCGAAGCCGAAATGGCGAGCCGCGCCATCTGGCTTGCCGGACGCTCCTCGCACGGCGTTCGTCAGCCAGTGCTCGCCGCCACTTTCGCGCGCCACGGAAACCTGTCGCAGGGTCAGAAGACCGCGATTGAGCATGTCGCCGCTCCAGCGCGGATCGCGGCGGTGGTTGGCCGCGCCGGCGCCGGCAAGACCACGATGATGAAGGCGGCAGCCGAGGCTTGGGAACTGGCCGGATACCGTGTCGTCGGCGCCGCCCTCGCCGGCAAGGCAGCCGAAGGGCTGGAGCAGGAAGCAGGCATCGTCTCGCGCACCCTGGCCTCATGGGAGCTGCGCTGGAACGAAGGTCGCGACCTGGTCGACGGCAAGACTGTCTTCGTCCTCGACGAGGCCGGCATGGTGTCGTCCCGTCAGATGGCGTTCTTTGTCGAGACGGTCACCAAAGCCGGCGCGAAACTCGTCCTGATCGGCGATCCGGACCAACTCCAGCCGATCGAGGCGGGCGCGGCGTTCCGCGCCATCGCCGATCGGATCGGCTATGCCGAACTCGATACCATCTATCGCCAGCGCGAACAGTGGATGCGCGAGGCCTCGCTCGACCTGGCGCGCGGTCGCATCGCCGAGGCGGTTGGCGCCTATCAGGCGAAGGGCAAGCTTCTGGGCTCTGACACCAAGGCTGAGGCGGTCGCAAAGCTGATCGCCGATTGGGACCGCGACTACGATCCGGCGAAGACCATGTTGATGCTGGCGCATCTGCGCCGCGACGTCCGCATGTTGAACGACATGGCGCGCGCGAAACTGGTCGAGCGCGGCATCGTCGGCGAGGGTTTTGCGTTCCAGACCGAGGAGGGTGAGCGAAAATTCGCCACCGGCGACCAGATCGTGTTTTTGAAGAACGAAGGTTCGCTCGGCATCAAGAACGGCATGATCGGCAAGGTGGTGGAAGCTGCGCCTGGCCGCATTGTCGTCGAGGTAGGAACGGACGGAAAGCGCCGCCAGGTCACGGTCGAAAGCCGGTTCTACCGCAACATCGACCATGGCTACGCCACCACGATCCACAAGAGCCAGGGCGCCACTGTCGACCGGGTGAAGGTTCTTGCTTCGCTGTCGCTGGACCGGCATCTGACTTATGTCGCCATGACCCGTCACCGCGAGGACCTCGCCGTCTATTACGGCCAACGCTCCTTCGCCAAAGCGGGCGGGCTCGTTGCGATCCTGTCGCGCAAGAACGCCAAGGAGACGACGCTCGATTACGAGCGGGCGCCGCTCTATCGGCAGGCCCTGCGGTTTGCCGAGGCGCGCGGCCTGCATCTCGTCAACGTCGCCAGGACGCTCGTTCGGGATCGGCTGCAATTGCTGCTGCGGCAGAAGCAAAAACTCGTCGATCTCGGTGCGCGTCTTGCAACGATCGGGGCCAGGCTCGGCCTCGTTCGCGGCGGCGACAGGCAATCGATC
PROTEIN sequence
Length: 831
VPVPHFSVGIVSRGEGRSAVLSAAYRHCAKMDYDREARTVDYSAKQGLLHEEFLLPADAPRWARLLIADRSVAGAAGAFWNRIETFEKRSDAQLAKDVTIALPIELSADRNIALVRDFVESHILSKGMVADWVYHDNPGNPHVHLMMTLRPLTEDGFGQKKVSVLRPDGQPLRNDAGKIVYELWAGGAAEFGAFRDGWFACQNRHLALAGLDIRVDGRSYEKQGIELQPTIHLGVGTKAIERKAAGKKWSPRLERVALQEERRVENARRIERRPEIVLDIITREKSVFDERDIAKILHRYVDDATLFRQLMARILQSPAVLRLERETVEFASGARVPSKYTTRELIRLEAEMASRAIWLAGRSSHGVRQPVLAATFARHGNLSQGQKTAIEHVAAPARIAAVVGRAGAGKTTMMKAAAEAWELAGYRVVGAALAGKAAEGLEQEAGIVSRTLASWELRWNEGRDLVDGKTVFVLDEAGMVSSRQMAFFVETVTKAGAKLVLIGDPDQLQPIEAGAAFRAIADRIGYAELDTIYRQREQWMREASLDLARGRIAEAVGAYQAKGKLLGSDTKAEAVAKLIADWDRDYDPAKTMLMLAHLRRDVRMLNDMARAKLVERGIVGEGFAFQTEEGERKFATGDQIVFLKNEGSLGIKNGMIGKVVEAAPGRIVVEVGTDGKRRQVTVESRFYRNIDHGYATTIHKSQGATVDRVKVLASLSLDRHLTYVAMTRHREDLAVYYGQRSFAKAGGLVAILSRKNAKETTLDYERAPLYRQALRFAEARGLHLVNVARTLVRDRLQLLLRQKQKLVDLGARLATIGARLGLVRGGDRQSI