ggKbase home page

scnpilot_solids1_trim150_scaffold_20672_2

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 798..1367

Top 3 Functional Annotations

Value Algorithm Source
Leucine rich repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8H241_ACACA similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 204.0
  • Bit_score: 230
  • Evalue 1.90e-57
leucine rich repeat domain containing protein similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 204.0
  • Bit_score: 230
  • Evalue 5.90e-58
Leucine rich repeat domain containing protein {ECO:0000313|EMBL:ELR19310.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 204.0
  • Bit_score: 230
  • Evalue 2.60e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acanthamoeba castellanii → Acanthamoeba → Longamoebia → Eukaryota

Sequences

DNA sequence
Length: 570
TTGACATCCCAGGCGCTGAGTGTTCGCAACAACAAGCTCACCGCAGTGCCCGCGAGCCTGGGTCAGCTCTCCATGCTGCAGGTGCTCGACTTGCAGCACAACTCCATCAGCTCCTTTGCCTCCGTGGCCAAGCTCGAGAAGCTGGAGAACCTCGACATCCAGTACAACAACTTGGAGACTCTTCCTCAGGGTACGCCACTCGCCACATACGGTACAGGAAGTCTTGTATCTTTCTTCGGGCTAAGCTTCATCTACGGTACAGGTCTGGGCAGTCTCAAGAGCCTGAAGCGTCTCCACCTCAAGTACAACCACATCAAGGAGCTGCCCCGCGAGATTGGCGACCTGGACAAGCTCGAGGAGCTGGACTTGGAGGGCAACAGGCTGACCGGGCTTCCGACTGAGATCTCCAAGCTGAAGAACCTTCACAAGATCTATCTCAGCAGGAACATGCTCGCCGAGCTGCCGGACGAGCTGGGTCAGCTCAAGTCGCTCGAGGAGCTCTTCCTGAACGACAACCAGTTGACCAACTTGGGATCCGTTGTGATGCTTCCGGGTACGCCGACGCTGTGA
PROTEIN sequence
Length: 190
LTSQALSVRNNKLTAVPASLGQLSMLQVLDLQHNSISSFASVAKLEKLENLDIQYNNLETLPQGTPLATYGTGSLVSFFGLSFIYGTGLGSLKSLKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTGLPTEISKLKNLHKIYLSRNMLAELPDELGQLKSLEELFLNDNQLTNLGSVVMLPGTPTL*