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scnpilot_solids1_trim150_scaffold_16_29

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(26466..27347)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 300.0
  • Bit_score: 488
  • Evalue 4.90e-135
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 300.0
  • Bit_score: 480
  • Evalue 5.10e-133
  • rbh
diaminopimelate epimerase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000374E1E0 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 284.0
  • Bit_score: 490
  • Evalue 1.60e-135
  • rbh

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Taxonomy

Ochrobactrum sp. EGD-AQ16 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGAAAAGCGCGTTGAATTCGCCAGGATGAACGGGCTCGGCAACGAAATCATCGTCGCCGACATGCGCGGCCGCGCCGACCGTATCACCCCCGCTGCGGCGATTGCGCTCAACGCCGATCCGGCGATGAAGTTCGACCAGATCATGGCGCTCCACGACCCACGCACGGCTGAGACCGACAATTACGTCTCTATCGTCAATTCGGACGGCAGCCCGGCACAGGCTTGCGGCAACGGCATGCGCTGCGTCGTGCAGGCGCTGGCGGCGGAAACGGGACGCAAGGATTTCCTCTTCGAGACGGTCGCCGGCATCCTCGACGCCCATGAGCATCCCGACGGGCTGATCTCGGTCGACATGGGCAAGCCGCGTTTCGGCTGGCAGGAAATTCCGCTTGCCGAAGAGTTCCGCGATACGCGCATGATCGAGCTTCAGGTCGGGCCGATCGACGCGCCCGTCCTGCATTCGCCCTCCCTCGTGTCGATGGGCAATCCGCACGCGATCTTCTGGGTCGAGGACGATGTCTGGTCCTACGCACTCGACCGTTTCGGCCCGCTCCTGGAAAACCATCCGATCTTCCCAGAGCGCGCCAACATCTCGATCGCGCAGGTAACCGCGCCCGACGCCATGACCATCCGCACATGGGAGCGCGGCGCCGGCCTGACCCGCGCCTGCGGCTCGGCCGCCTGCGCTGCCGCCGTCTCTGGCGCGCGGACCCGCCGCACCGGGCGGACGGTGACGGTAACCGTGCCCGGCGGCCCACTCCTCATCGAATGGCGCGACAACGACCATGTCGTGATGACCGGCCCGGCCGAATGGGAATTTTCCGGCACGCTCGACCCCTCGACCGGCCAGTGGGTGCGCGACGAGCGGGGCGCGGCCTGA
PROTEIN sequence
Length: 294
MEKRVEFARMNGLGNEIIVADMRGRADRITPAAAIALNADPAMKFDQIMALHDPRTAETDNYVSIVNSDGSPAQACGNGMRCVVQALAAETGRKDFLFETVAGILDAHEHPDGLISVDMGKPRFGWQEIPLAEEFRDTRMIELQVGPIDAPVLHSPSLVSMGNPHAIFWVEDDVWSYALDRFGPLLENHPIFPERANISIAQVTAPDAMTIRTWERGAGLTRACGSAACAAAVSGARTRRTGRTVTVTVPGGPLLIEWRDNDHVVMTGPAEWEFSGTLDPSTGQWVRDERGAA*