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scnpilot_solids1_trim150_scaffold_1780_23

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(18251..18658)

Top 3 Functional Annotations

Value Algorithm Source
RNAse PH (EC:2.7.7.56) similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 135.0
  • Bit_score: 249
  • Evalue 5.10e-64
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 135.0
  • Bit_score: 249
  • Evalue 2.30e-63
Ribonuclease PH n=1 Tax=Rhodanobacter denitrificans RepID=M4NSB2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 135.0
  • Bit_score: 249
  • Evalue 1.60e-63

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGAACGACATCCGCCGCCCCAGCGGCCGCGCCAGCGACCAGCTGCGCAGCGTCAGCCTCGAACGCCACTACACCCGCCATGCCGAAGGCTCGGTACTGGTGAGCTTCGGCGATACCCGCGTGTTGTGCACCGCCAGCATCGAGGACCGCGCGCCGGCCTGGCTGCGCGGCAAGGGCGAAGGCTGGATCACCGCCGAATACGGCATGCTGCCGCGCGCCACCAACACCCGTACCCAACGCGAGGCCACGCGCGGCGGGCAGGGCGGCCGCACCATGGAGATCCAGCGGCTGATCGGCCGCAGCCTGCGCGCCTGCGTCAACCGGCAGGCGCTGGGCGAGCGCGTGATCACGCTGGACTGCGACGTGCTGCAGGCCGCGCCGAGGATTCGGACTGCGACACCGACATGA
PROTEIN sequence
Length: 136
MNDIRRPSGRASDQLRSVSLERHYTRHAEGSVLVSFGDTRVLCTASIEDRAPAWLRGKGEGWITAEYGMLPRATNTRTQREATRGGQGGRTMEIQRLIGRSLRACVNRQALGERVITLDCDVLQAAPRIRTATPT*