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scnpilot_solids1_trim150_scaffold_14_69

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_76

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 82794..83366

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHU9_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 190.0
  • Bit_score: 147
  • Evalue 1.20e-32
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 190.0
  • Bit_score: 147
  • Evalue 3.90e-33
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 194.0
  • Bit_score: 147
  • Evalue 1.70e-32

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGACAGGTCAAAAAGATTATACGTACTTAACTGATGAGGCATTAATCGTACTCATGCAACAGGGAGATAACCGGGTATTTGATGAAATATATAAAAGATACGGCCAAAAAATATTCAGGTATTTTTTTAAAATGCTATGGCAGGATAAAGACCGGGCTGAGGATTTTACACAAGACCTATTTGTAAAACTCATAAAGAACAAAACCGGGTATGACGCAACCCGAAATTTTGCCACCTGGCTTTTTAGTATTGCCCATAATATGTGTAAAAATGAGTACCGAAAACAGGAAGTAAGAGTGAAATTTAATAAAATGAAAGAGGCAACAAATACCATCCAGGCTCATAACCCTGACCTGGCAAGGTTTAGCACGGCACTGCAGCAATGTACAGATGCCCTGCAACCGCAAAAAAAGGAATTGTATTTTTTACGTATTATTGAAAATTATACCATTCCGCAAATTGCTGCCATTATGGATTTACCGGAAGGCACTGTAAAATCAAGGATTTTTAATTTATTAAAAGAGATGAGAGAAAATTTAAAACAGTTTGAAGGATTGCTTACTTACCCATAA
PROTEIN sequence
Length: 191
MTGQKDYTYLTDEALIVLMQQGDNRVFDEIYKRYGQKIFRYFFKMLWQDKDRAEDFTQDLFVKLIKNKTGYDATRNFATWLFSIAHNMCKNEYRKQEVRVKFNKMKEATNTIQAHNPDLARFSTALQQCTDALQPQKKELYFLRIIENYTIPQIAAIMDLPEGTVKSRIFNLLKEMRENLKQFEGLLTYP*