ggKbase home page

scnpilot_solids1_trim150_scaffold_2_41

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_76

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 50210..51583

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadA n=1 Tax=Segetibacter koreensis RepID=UPI0003782CDF similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 460.0
  • Bit_score: 715
  • Evalue 3.50e-203
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 458.0
  • Bit_score: 697
  • Evalue 2.40e-198
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 458.0
  • Bit_score: 697
  • Evalue 1.10e-197

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1374
ATGAGTAAAACGAAGTCAGCATTTTTTTGCCAAAATTGTGGTTATGAAAGCGCTAAGTGGTTGGGTAAATGTCCTTCCTGTAATCAATGGAATGTTTTTGTAGAAGAAATCATACAAAAAGGGAATGAACGTATAGATAAAGATGAATGGAAAGAGTTTAAAAGATATCCTGGTCAAAAAGTAATTGCATTGCATGAAGTGAGCAGTGCAGCAGATAAAAGAATTATTACCGGGGATGCAGAACTTAACCGGGTATTGGGTGGAGGCATTGTGTTAGGCAGTATTGTTTTAGTAGCAGGTGAGCCTGGCATTGGAAAAAGTACTTTGTTTCTTCAAAATAGTTTGCAGCTTACAGATACATCAACTTTATACATTAGTGGGGAAGAGAGTGAGCAACAAATAAAGATGCGGGCAGACCGGGTAGGAATGCACAACGAAAATTTTTACCTGCTTACAGAAACAAACACCCAAACAATTTTCCAGGAGATTAAAAAGATGAAACCCGAATTGGTGATTGTAGATTCAATACAAACCCTGCATTCACCATTTGTAGAATCCTCACCTGGAAGCATTAGTCAAATTAGAGAATGCGCCGCCGAATTACAACGTTTTGCAAAAGAAACGCAAACACCTGTTTTCTTAATTGGCCATATTACAAAAGACGGGGGCATTGCCGGGCCCAAAATATTGGAACATATGGTTGATACGGTATTGCAATTTGAAGGTGACAGGCATTATGCCTACCGGATATTACGCACTTTAAAAAACCGTTTTGGTTCTACAGCTGAGCTGGGTATTTATGAAATGACAGGCACGGGAATGCGGCCTGTGCTTAACCCCAGTGAAATACTTATAACACAAAAGGAAGAAGCGCTGAGCGGTATTGCTATTGCTGCTACCATGGAGGGAATGCGGCCCTTATTAATAGAAACCCAGGCCCTGGTAACACAAAGTGTATATGGTACACCCCAAAGAACGGTAAGTGGATTTGATTTAAGAAGATTACAACTCTTACTGGCCGTACTTGAAAAAAGAGGGGGTTTTCATTTTGGAATAAAAGATGTTTTTATAAATATTGCCGGCGGCGTAAAAGTTGAAGACCCTTCTATTGATTTAGCTATTGTAAGCGCTTTACTAAGTAGTTACGAAGACATGCCTATTGCTCAAAATATTTGTTTTGCCGGGGAAGTAGGTTTGAGTGGTGAGATTCGTGCCGTAAATAGAATAGAACAACGAATAGCAGAAGCAGAAAAATTAGGATTTGAAAAAATTGTAGTGAGCCGTTATAATGCAAGAGCAACAGAAAAATTAAAAACGGGTATTGACATTATTCCATTAGCCAAGGTAGAAGAGTTGTACCGTTATTTATTTTAG
PROTEIN sequence
Length: 458
MSKTKSAFFCQNCGYESAKWLGKCPSCNQWNVFVEEIIQKGNERIDKDEWKEFKRYPGQKVIALHEVSSAADKRIITGDAELNRVLGGGIVLGSIVLVAGEPGIGKSTLFLQNSLQLTDTSTLYISGEESEQQIKMRADRVGMHNENFYLLTETNTQTIFQEIKKMKPELVIVDSIQTLHSPFVESSPGSISQIRECAAELQRFAKETQTPVFLIGHITKDGGIAGPKILEHMVDTVLQFEGDRHYAYRILRTLKNRFGSTAELGIYEMTGTGMRPVLNPSEILITQKEEALSGIAIAATMEGMRPLLIETQALVTQSVYGTPQRTVSGFDLRRLQLLLAVLEKRGGFHFGIKDVFINIAGGVKVEDPSIDLAIVSALLSSYEDMPIAQNICFAGEVGLSGEIRAVNRIEQRIAEAEKLGFEKIVVSRYNARATEKLKTGIDIIPLAKVEELYRYLF*