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scnpilot_solids1_trim150_scaffold_314_4

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 6067..8394

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFC7E6 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 763.0
  • Bit_score: 846
  • Evalue 2.90e-242
  • rbh
TolB protein {ECO:0000313|EMBL:EZP44718.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 780.0
  • Bit_score: 833
  • Evalue 2.80e-238
cadC; Transcriptional activator cadC similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 769.0
  • Bit_score: 816
  • Evalue 1.00e-233
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2328
ATGGAACCCATCAACAGCGCTCTTTCCAACACTGAACGCCTGCATATCGGCGATTGCCTGATCGTCCTGCCGTCGCGCGAGGTACATGCGCCCGGTGTACGGCGCAGCGTGCGGCTCACGCCCAAGGCGATCGGTGTGCTGCTGGCGCTGGCGCGCGGCGCCGGCAATGTGGTCACCCGTGACGAACTGTTCGCCCAGGTGTGGCCCGATACCCTGCCGACCAATGACGTATTGACCCAGGCGGTCACCCAGCTGCGCAAGGCGTTGTCTGCCGGCGGCGCGTTCCCGCAGGGGCAGGAGTACATCGAGACGATCGCCAAGACCGGCTATCGCTTGCGTGCCCCGGTGGTATGGGAGCCGCGGGAGGAGCCGGCAGCACCGGCGGTCGACGCGCAGGCGCAGGAACCTGACCGAAGCGCGGCTGCCGCGGCCGGGCCGGCACCGCTTGTGGAGGGCGCCAGCGCTGCGGCACCCCCGCGCAGCGGAATCTGGCGCCGGGTGCGCCGCAGGCTGCTGTTGGCGGTGGGGCTGCTGTTGGTGTGCAGTTCGCTGACGATGGCGTGGCTGCTGTGGCAACGCCCGGCTACCGAGAGCGCGCTGGATGCGGCCACGGCCGACGGTACCGGCGTGATCGGCAGTCCGCAGCGTCCTTACCGCCTGATCACCGCCAGGCAGGGGTTCGGAACGTTTCCGGCGCTGTCGCCCGATGGCGCGCTGGTCGCATTTGCCGACGAAAGCGACGGCGGTTCGACGCTCAAGGTGCAGAGCACCGGCAGCACCACCTCGGCGACCCTGGTGAAGCTGCCCGCCGGTGCCATGGACCGGTTCCCGGCGTGGTCGCCGGACGGGCGTGAGGTCGCATTCGCACGGTTCCATGCCGACGGCAGCTGCGAGGTGCTGGTGGTTGGGGTTACCGGTGGCAGTGCACGTCGTGCCACTGCCTGCGATGGCGCCGAGATGCTGAGCTTCAGCTGGACGCCGGACGGGCGCGGGTTGGTGTTCGGCACGATGACCGGCCGCCATGGCGCGCCCGGCATCCGTACCCTGGACCTGGCAACCGGGCGCTGGACGGCGCTGGATTACGAACGCGGCGAAGGCGATTTCGATTACGCACCGCGCTACTCGCCCAGCGGCCGCCAGCTTGGATTCACCCGCAACCCGCAGGTGGGTGGGGTGTGGGTGATGGCTGCCGACGGCGGCAACGCCCGTCGCGTCACCAGCGGCAGTGCGGAAATGCGCGGCTGGGCGTGGCTCGGCGAGCACGCCATCGTGTTCGGGCGGCGGATCGACAGCGAATCCCGGCTGTACCAGGTGGATCTGCGTTCGGGCCTGTTGAAGGACCTGGGCGTGGACGATGCGCAGAGTCCGAGCGTGGCCGGCATGGGCAAGCTGCTTGCCTTCGTGCATCGCGCACCGCAGTTCGGCCTGTTCCGGGTACCGCTGGACCATCCCGAGCGCAAGGAACGGCTGTTCGCATCAATGGGGCGCGATGCGCAGCCGATGATCGCGCCCGACGGGCAGCAACTGGTGTTCACTTCCAACCGCTCCGGCGCGTTCGCGCTGTGGTGGGCGCGCCTGGGGCAGCCCGATTCGCTGCGCCTGGTGGAGGGCTTCCGCCCGGAGGCGCGGCAGTCGCCGGACTGGCTGGCCGACAGCCAGCAGGTGCTGGTCAGTGGGCGCGATGATGATGGGCGACCGGGCATTTACGAGGTGTCACCGGAGCAGGGGCAGTGGAAGCGCTTGCCGATCCCCGTGGCCGAACCGCTGCAGGCCGTCTACGGCCCCAGCTCCAACCTGGTTTTCGTGATCGGCAGCGAGGGCGATGGCCCGGTCACGCTGTCGCTGTTCGACCGCGGCGGTGGCCGCTGGCGGCGCCTTGCCCAGGTACCTGGCGCCTCGCAGGTACGCTACGACCGCAGCACGCAGCGGGTGTTGTTCACCCGGCTCGCGGAAGGCGGCCTGTGGTCGGCCGATGCCGGTCTTGCACCCGGCAGCTTCCGCGAGCTCAGCGGCGAAGTGCCGACCCGCTGGCGTTTCCGTACCTGGGCCCTCGGCGGCGATGGCGCGGTGGCCTATCTGCGCCAGGATGACGGCTGCTCGGTACAGCTGAGCCGGCTCGACCAGTCGCAGGCGCCACGCTGCCTGGAGGTGCGGGCAGCCAGCGCCACCAATGGCTTCAGCGTGGCTCCCGATGGTGATGCCGTGTACGTGGCGCTGGCGGTTTCCGATGGCACCGACATCGGCATCATGCCGGTGCCCGAAAGCGCTTCGCGGCCATCGCTCGGCGTGCTCAAGTGGTTGCCGGCATTGGGAAAACCGGATTCGTGA
PROTEIN sequence
Length: 776
MEPINSALSNTERLHIGDCLIVLPSREVHAPGVRRSVRLTPKAIGVLLALARGAGNVVTRDELFAQVWPDTLPTNDVLTQAVTQLRKALSAGGAFPQGQEYIETIAKTGYRLRAPVVWEPREEPAAPAVDAQAQEPDRSAAAAAGPAPLVEGASAAAPPRSGIWRRVRRRLLLAVGLLLVCSSLTMAWLLWQRPATESALDAATADGTGVIGSPQRPYRLITARQGFGTFPALSPDGALVAFADESDGGSTLKVQSTGSTTSATLVKLPAGAMDRFPAWSPDGREVAFARFHADGSCEVLVVGVTGGSARRATACDGAEMLSFSWTPDGRGLVFGTMTGRHGAPGIRTLDLATGRWTALDYERGEGDFDYAPRYSPSGRQLGFTRNPQVGGVWVMAADGGNARRVTSGSAEMRGWAWLGEHAIVFGRRIDSESRLYQVDLRSGLLKDLGVDDAQSPSVAGMGKLLAFVHRAPQFGLFRVPLDHPERKERLFASMGRDAQPMIAPDGQQLVFTSNRSGAFALWWARLGQPDSLRLVEGFRPEARQSPDWLADSQQVLVSGRDDDGRPGIYEVSPEQGQWKRLPIPVAEPLQAVYGPSSNLVFVIGSEGDGPVTLSLFDRGGGRWRRLAQVPGASQVRYDRSTQRVLFTRLAEGGLWSADAGLAPGSFRELSGEVPTRWRFRTWALGGDGAVAYLRQDDGCSVQLSRLDQSQAPRCLEVRAASATNGFSVAPDGDAVYVALAVSDGTDIGIMPVPESASRPSLGVLKWLPALGKPDS*