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scnpilot_solids1_trim150_scaffold_463_31

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 30503..31129

Top 3 Functional Annotations

Value Algorithm Source
rpoE1; RNA polymerase factor sigma-70 (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 186.0
  • Bit_score: 274
  • Evalue 3.90e-71
RNA polymerase sigma70 factor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036BC0D2 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 194.0
  • Bit_score: 277
  • Evalue 1.10e-71
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:AEO41203.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 186.0
  • Bit_score: 274
  • Evalue 1.70e-70

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Taxonomy

Xanthomonas alfalfae → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAACGCCGGCGCGACCATTGCCGTGTCAACCGATCCGGCGGCCGCGCGTTATCGCTGTCAGGACCTGCCGGAACGCTACCCTGTGCTGGTGACAAGCCCACCCCTGACGCCCGTTGCCGCCCCCGCCTCGCTGGACGCCTTCCTGGCCGGCGTCGGGCCGCGTGCGTTCCGCTTCGCCGAGGCCGGCCTGCGCCAGCGCGACGATGCGCTGGACGCGGTGCAGGACGCGATGGAGCGGATGCTCGGTTACCGCGAGCACCCGGCCGAGGAATGGACGCCGCTGTTCTGGAGCATCCTGCGCCGGCGCATCATCGACCTGCAGCGGCGGCGCGGCTTCCGGCTGAAGTTCTGGGCACCGGCGCAGGACGGGGACGGCCCGATCGACTGGGCCGACGACAGCCCCGGCCCGGCACGGCAGCACGAGCAGCGCGAGGAGTACGCGCGGCTGGTGCAGGCGTTGCGGCGGCTGCCGGCACGCCAGCGCGAGGCGTTCAGCCTGCGCGTGCTGCAGGAACTGGACGTGGCCACCACGGCACGGATCATGGGCTGCTCGGAAGGTTCGGTGAAAACCCACCTGTCGCGTGCGCGCGACGCATTGCAGAAACAACTGGAGGTCTCGCGGTGA
PROTEIN sequence
Length: 209
MNAGATIAVSTDPAAARYRCQDLPERYPVLVTSPPLTPVAAPASLDAFLAGVGPRAFRFAEAGLRQRDDALDAVQDAMERMLGYREHPAEEWTPLFWSILRRRIIDLQRRRGFRLKFWAPAQDGDGPIDWADDSPGPARQHEQREEYARLVQALRRLPARQREAFSLRVLQELDVATTARIMGCSEGSVKTHLSRARDALQKQLEVSR*