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scnpilot_solids1_trim150_scaffold_50_105

Organism: SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 122868..124187

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA 5-methyluridine methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 439.0
  • Bit_score: 824
  • Evalue 1.60e-236
  • rbh
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01010}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 439.0
  • Bit_score: 824
  • Evalue 7.30e-236
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RLMD_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 439.0
  • Bit_score: 824
  • Evalue 5.20e-236
  • rbh

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGACTGCTCCTGTTCTTATCGAATCCCTGGATCAGGAAGGCCGGGGCGTTGCGCACGCTGAAGGCAAGGTCATTTTCATCGAGGGCGCCCTGCCGGGGGAGGTTGTCACCTATAACGCCTATCGCAGAAAACCCAGCTTCGAGCTTGCCCAGGTCAATCAGATTCTCAAGCCTGCGTTTTCGCGGGTAACGCCGGAATGCAACCATTTCGGCATCTGCGGCGGTTGCAGCATGCAGCATATGGATGTTCGCACCCAGGTGGCGGCAAAACAGCGCGTGCTCGAAGACAATCTCAAGCACATCGGCAAGGTCGCGCCCGAACTGATATTGCCGGCGGTTTATGGATCATCCTGGGGTTACCGCTACCGGGCGCGGCTGTCGGTCCGCTACGTGGCAAAAAAAGGCGGCGTGCTGGTCGGTTTTCATGAAAAGCGCAGCAGCTTCATTGCCGACATGCAGACCTGCAGGATCATGCCGCCGCGCATTTCCGCGCTCATCATGCCATTACGAAAGCTGGCGGAAACCCTGTCCATCCGCGAGCGTCTGCCGCAGATTGAAGTTTCACTGGGCGAGGGCGTGGATGTACTGGTCCTGCGCATTCTTGAACCCCTGACTGTGCAGGATGAAGCCTTGCTCAAGGCTTTTGCCGATCAGCATCAAGTTCAGCTTTTTCTGCAAACCGGCGGTCCTCAAACGGCTTGTCCTTTCTATCCCAAGGACGCGCCGGAATTGAGTTATACCCTGCCGGAATTCGATGTAACCATTCCGTTTCATCCGACTGAGTTCACCCAGGTGAATCCGGCGGTCAATCGCGTACTGGTGCGGCGCGCGCTAAACCTGCTCGATCCCCGCGCGGGAGAGCGCATTGCGGACCTGTTTTGCGGCCTGGGTAATTTCACCCTTCCCATTGCGCGACGCGGCGCGCAAGTCGCAGGCTATGAAGGCAGCGCAGCGCTCGTCTCCCGCGCCCGTCAAAATTCACAACGCAATGGGCTAGGGGATGGTACGCGTTTCACGGAGGCCAACCTGTTTGAAATCGATGAAAGCTGGATGCGGGAGCAGGGGGATTTCGACAAGATGCTGATCGACCCGCCGCGGGAGGGCGCTATCGCCGTGGTGACCGCTCTCGAAGAGAAGCAACCCAAACCGTGGCGCATCGTTTACGTCTCCTGCAATCCCGCCACACTCGCGCGCGACGCGGGCGTGCTAGTGCACAGGAATGGATATGCGTTGAAGGCGGCAGGTGTCATCAACATGTTTCCGCATACCGCGCATGTCGAGTCCATCGCCCTGTTCGAGAAAGCCGGCGGGCAAGCTTGA
PROTEIN sequence
Length: 440
MTAPVLIESLDQEGRGVAHAEGKVIFIEGALPGEVVTYNAYRRKPSFELAQVNQILKPAFSRVTPECNHFGICGGCSMQHMDVRTQVAAKQRVLEDNLKHIGKVAPELILPAVYGSSWGYRYRARLSVRYVAKKGGVLVGFHEKRSSFIADMQTCRIMPPRISALIMPLRKLAETLSIRERLPQIEVSLGEGVDVLVLRILEPLTVQDEALLKAFADQHQVQLFLQTGGPQTACPFYPKDAPELSYTLPEFDVTIPFHPTEFTQVNPAVNRVLVRRALNLLDPRAGERIADLFCGLGNFTLPIARRGAQVAGYEGSAALVSRARQNSQRNGLGDGTRFTEANLFEIDESWMREQGDFDKMLIDPPREGAIAVVTALEEKQPKPWRIVYVSCNPATLARDAGVLVHRNGYALKAAGVINMFPHTAHVESIALFEKAGGQA*