ggKbase home page

scnpilot_solids1_trim150_scaffold_99_11

Organism: SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 11854..12459

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3,4-dioxygenase beta chain {ECO:0000313|EMBL:CCU62712.1}; EC=1.13.11.3 {ECO:0000313|EMBL:CCU62712.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 202.0
  • Bit_score: 321
  • Evalue 7.00e-85
protocatechuate 3,4-dioxygenase (EC:1.13.11.3); K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 201.0
  • Bit_score: 198
  • Evalue 1.50e-48
Protocatechuate 3,4-dioxygenase beta chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ65_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 202.0
  • Bit_score: 321
  • Evalue 5.00e-85
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGTTTGCCGCGGGTATATTGCCGCCTGCCAGTGCAGTTTTTGCGAAGACCCTGGAGCGGACCCAGGATCAGATCCTGGGTCCCTTTTATCCCATTATGAGTGAACCTGATCGCAGCGGTGACCTCACGCGGGTACCCGGAGGATCAGGACGCGCCAAGGGACAGCCCATCATCGTCAGGGGAAGAGTATGCAATCCTGACGGCAAACCGGTCTCGGGTGCGGAGGTTGAAATCTGGCAAGCCAACGCGGCCGGACGCTATGCGCATCCCGACGATACCAATCCCGCGCCCCTCGATCCCAATTTCCAGGGCTTCGGCGCAGTGACTACAGGTCCTGACGGCTTCTACCAGTTTAAAACAATAAAACCGTTGCATTATCCGGCAGGCAGCATCGGAATTCGGCCGGCTCACATCCATTTCGACGTCAGAGGCCGTCATGATGTACTGGTAACCCAGATGTACTTCGAGGGAGACCCCTACAATGAGAAAGACTCCTTCCTCCAAAGCGTTCTCAATCCGGACGCCTTGATTGTAAAGCTGCTTTCGCCAGCCGCAGAGGAGCCTGAGTTCATGGTGGCAGTATTCGATATTGTCTTCAGGGGCTAG
PROTEIN sequence
Length: 202
MFAAGILPPASAVFAKTLERTQDQILGPFYPIMSEPDRSGDLTRVPGGSGRAKGQPIIVRGRVCNPDGKPVSGAEVEIWQANAAGRYAHPDDTNPAPLDPNFQGFGAVTTGPDGFYQFKTIKPLHYPAGSIGIRPAHIHFDVRGRHDVLVTQMYFEGDPYNEKDSFLQSVLNPDALIVKLLSPAAEEPEFMVAVFDIVFRG*