ggKbase home page

scnpilot_solids1_trim150_scaffold_99_37

Organism: SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 40939..41241

Top 3 Functional Annotations

Value Algorithm Source
Integrase, catalytic region n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GXH4_CUPNN similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 55.0
  • Bit_score: 68
  • Evalue 5.00e-09
Integrase {ECO:0000313|EMBL:KIF84106.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 59.0
  • Bit_score: 76
  • Evalue 2.60e-11
integrase, catalytic region similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 55.0
  • Bit_score: 68
  • Evalue 1.60e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
GTGCTAAAGATCGGACAGCAGGCGCTGGAAATCGATTTTTCAAGCGTCGCTCAACAAGGCAGGATTGCTGAGCACAAAAAGATCAAAGAGATGATGGGCCGTATGCACGATCTGCCGGTTGCCCGGCAATATCCGATACTGTCGCTGGCGAGTTCGACCGATTATTATCAGGCGCAGAAATTCAGCGAAGCCGACCTGGAATTGATGCGCCGGATCGACGCACTGCATCTGGAGCATCCATTTGCAGACAACCGAAGGGACGAAGGGTCGGTCTCATGGACCGACCCTCTCAGTACTGCTTGA
PROTEIN sequence
Length: 101
VLKIGQQALEIDFSSVAQQGRIAEHKKIKEMMGRMHDLPVARQYPILSLASSTDYYQAQKFSEADLELMRRIDALHLEHPFADNRRDEGSVSWTDPLSTA*