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scnpilot_solids1_trim150_scaffold_9569_6

Organism: SCNPILOT_SOLID_1_TRIM150_Truepera_66_100

near complete RP 48 / 55 BSCG 46 / 51 ASCG 9 / 38 MC: 1
Location: 1798..2499

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=RL1_DEIGD similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 233.0
  • Bit_score: 346
  • Evalue 1.70e-92
  • rbh
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 233.0
  • Bit_score: 346
  • Evalue 5.30e-93
  • rbh
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 233.0
  • Bit_score: 346
  • Evalue 2.40e-92

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Taxonomy

Deinococcus geothermalis → Deinococcus → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCCAAGCACGGTAAGCGTTACCGCGAGCTGGCGCTCAAGGTCGACCGCGACCGCCTCTACTCCGTCGACGAAGCCGCCGGCCTCGTCAAGGAGTTGGCAAGCGCCAAGTTCGACGAGACCGTCGAAGCGCACTTCCGCCTCGGCATCGACCCGCGCAAGTCCGACCAGAACGTCCGCGGCACCGTGGCCCTGCCACACGGCACAGGCAAGACGGTACGCGTCCTCGCCGTCACGCAGGGCGACGGGGTGGCCGCTGCGGAGGCAGCTGGCGCCGACATAGTTGGTGGCAGCGACATCATCGAGCGCATCTTGGGTGGCTGGATGGACTTCGACGCCGTCGTCGCCACGCCAGACATGATGGCGGCCATCGGCTCCAAGCTCGGCCGCGTGCTCGGACCGCGTGGGCTCCTCCCGAACCCCAAGGCCGGCACCGTTGGCACCGACATCGGTGGCATCGTCCGCGCCCTCAAGGCGGGCCAGATCGAGTTCCGTGCCGATAAGACGGGCGTCGTGCACGCTCCCATCGGTAGGGCCAGCTTCGGGGCGGACAAGCTCGCCGAGAACTTCGCCGCGCTGCGCGGAGCCGTCGAGGCCGCCAAGCCTGATACCGCGCGCGGCCAGTACCTCAAGACCATTCACCTCACCTCTACGATGGGGCCGAGCGTGCGCGTCACGCTAAGCACCTCGACTGAGGCCTGA
PROTEIN sequence
Length: 234
MAKHGKRYRELALKVDRDRLYSVDEAAGLVKELASAKFDETVEAHFRLGIDPRKSDQNVRGTVALPHGTGKTVRVLAVTQGDGVAAAEAAGADIVGGSDIIERILGGWMDFDAVVATPDMMAAIGSKLGRVLGPRGLLPNPKAGTVGTDIGGIVRALKAGQIEFRADKTGVVHAPIGRASFGADKLAENFAALRGAVEAAKPDTARGQYLKTIHLTSTMGPSVRVTLSTSTEA*