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scnpilot_solids1_trim150_scaffold_62276_2

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(312..1259)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 338.0
  • Bit_score: 485
  • Evalue 1.30e-134
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 338.0
  • Bit_score: 485
  • Evalue 5.80e-134
Pseudouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDR8_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 338.0
  • Bit_score: 485
  • Evalue 4.10e-134

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGTCGATTATAGAGGGCAAACCGCCAACGGGCGTGGCCGCATGCCAGTTGCAGGTGGACGCCGAATCCGCCGGGCAGCGGCTGGACAATTTCCTGCTGCGCCACTTGAAGGGCGTGCCCAAAACGCACGTCTACCGCATCATCAGGAGCGGCGAGGTGCGCCTGAACAAGGGCCGCACCAGCGCCGATGCGCGCGTGGCCGAGGGCGACCTGGTGCGCCTGCCGCCGGTGCGCGTGGCCGAGCGGCCGCCGGTTCAGGCCGCGCCGGCGCGCGAGTTCCCCATCCTGCTCGAAGACGACTGGCTCGTCGCGCTGGACAAGCCCGCGGGCGTGGCGGTGCACGGCGGCAGCGGCGTGAGTTTCGGCGTCATCGAGCAGTTGCGCCGCGCGCGCCCCGAGGCGAAATTCCTCGAACTCGTGCACCGGCTCGACCGCGATACCTCGGGCATCCTGCTCGTGGCCAAACGCCGCTCGGCGCTCACCGCGACCTATCTGGCGCTCGTGACCGGCACCTGGCCCGCCCGGCTCAAGGTGATCGATGCGCCACTGCACAAGTACCTGCAGCCCGATGGCGAGCGGCGCGTACGCACCACGACGACGCAGGACCCCGATGGTATGCGCGCGGTCACGCTGGTCAAGCGCCGCGACGTGCTGGCGCCGCGCCATGCGCAGGGCCTGCCTGCGATGAGCCTTCTGGAGGTGACGATCAAGACCGGGCGCACGCACCAGATCCGCGTGCATCTGGCCAGCCAGGGCCATGCCATCGTGGGTGACGAAAAATACGGTGACTTCGAGCTCAACAAGCGCTTGCACAAGCTCGGTTTGGCACGCATGTTCCTGCACGCGTGGCGGCTGCAATTCGATCATCCCGCGAGCGGCGAACGCATTGAACTGCACGCCGAACTGCCGCCGGACCTCGCCGCCTTCATTCCTTCCGAGACGCCATGA
PROTEIN sequence
Length: 316
MSIIEGKPPTGVAACQLQVDAESAGQRLDNFLLRHLKGVPKTHVYRIIRSGEVRLNKGRTSADARVAEGDLVRLPPVRVAERPPVQAAPAREFPILLEDDWLVALDKPAGVAVHGGSGVSFGVIEQLRRARPEAKFLELVHRLDRDTSGILLVAKRRSALTATYLALVTGTWPARLKVIDAPLHKYLQPDGERRVRTTTTQDPDGMRAVTLVKRRDVLAPRHAQGLPAMSLLEVTIKTGRTHQIRVHLASQGHAIVGDEKYGDFELNKRLHKLGLARMFLHAWRLQFDHPASGERIELHAELPPDLAAFIPSETP*