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scnpilot_solids1_trim150_scaffold_100_84

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(80459..81160)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FA0301 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 222.0
  • Bit_score: 342
  • Evalue 3.20e-91
  • rbh
Transcriptional regulatory protein DegU {ECO:0000313|EMBL:KJL29997.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 223.0
  • Bit_score: 348
  • Evalue 8.10e-93
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 229.0
  • Bit_score: 303
  • Evalue 5.20e-80

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCGCATCCTGATCTGCGAGGACTCCGTGCTGCTGCGCGAGGGCCTGGTGCGCCTGCTGGAGGATGCCGGTCACGAGGTGATCGCCGCCCTCCCGGACACTCACGGACTCACGGACGCCGTGGTCGAGAAGGATCCCGAGCTGTGCATCCTGGACGTGCGGCTGCCACCGACGTTCACCGACGAGGGCATCCGCGCGGCCCTGGAGATCCGCGCCGCGCATCCGTCCCTCCCGCTGCTCGTGCTCTCCCAGTACGTCGAGGAGCGCTACGCGAGCGACCTGATCGCCGCCCAGAGCGGATCGACTCAGGGCGGAGCGCTCGGCTACCTGCTGAAGGACCGGGTGGCGGACGTCGCCGAGTTCATCGAGTCGGTCCGGCGCATCGAGGCTGGTGCGACCGTGCTCGACCCCGAGGTGGTCGCGCAGCTGCTGACCCGCCGCAACAGGGACGAGCGGATGCTGCGCCTGACCGAGCGCGAGCGCACGGTGCTCGCGCTCATCGCGGAGGGGAAGCAGAACAGCACGATCGCCGAGCTGCTGTTCCTCAGCGAGGCCAGTGTCGAGAAGCACATCACAGCCATCTTCCAGAAGCTCGGGCTGGAGCCCGAGGACGGCAATCGGCGGGTGCTGGCGGCACTCGCCCACATCGAGAGCACGGGATCTGCGGATGCCGGACACGAGACTCAGGGAGGTCTGCGATGA
PROTEIN sequence
Length: 234
MRILICEDSVLLREGLVRLLEDAGHEVIAALPDTHGLTDAVVEKDPELCILDVRLPPTFTDEGIRAALEIRAAHPSLPLLVLSQYVEERYASDLIAAQSGSTQGGALGYLLKDRVADVAEFIESVRRIEAGATVLDPEVVAQLLTRRNRDERMLRLTERERTVLALIAEGKQNSTIAELLFLSEASVEKHITAIFQKLGLEPEDGNRRVLAALAHIESTGSADAGHETQGGLR*