ggKbase home page

scnpilot_solids1_trim150_scaffold_83_46

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(37401..37907)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MY04_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 168.0
  • Bit_score: 248
  • Evalue 3.50e-63
ECF RNA polymerase sigma factor SigL {ECO:0000313|EMBL:KJL32933.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 166.0
  • Bit_score: 269
  • Evalue 4.50e-69
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 168.0
  • Bit_score: 232
  • Evalue 8.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGGCAGAAGACGATGACGAGCGGCTGACCGCGCTGTACGAGCTGCATGCCGGACCGATCCGGCGGTACGTGGTGAGCATCACGGGCAACCGGGGGTCCGCAGACGATGTCGTGCAGGAGACGCTGCTGCGCGCCTGGCGCACGCCGCGCATCCTGGAGCAGGATCCGTCCACGTCGAGGGCGTGGATGATCACCGTCGCCAGGCACATCGTGATCGACGAGGTGCGCAGCGCCCGTCGCCGCCACGAGAACCCGGTCGCGGAGCTGCCGGAGCGGGTCACCGACGACCACACGGATCGGCTCTTCGACGCGCTGCTGATCCAGGACGCACTGGCCGCCGTCAGCCCCGAGTACCGAGAGGTGGTGATCGCGGCGTACTACCGCGGACGCAGCGTGGGCGAGGTCGCGGCGGAGCTGGGCATCCCGGAGGGGACGGTCGAGTCCCGGATGCACTACGGACTGAGGGCCCTGCGGCTGGCGCTGCAGGAGAGAGGGGTGACGCGGTGA
PROTEIN sequence
Length: 169
VAEDDDERLTALYELHAGPIRRYVVSITGNRGSADDVVQETLLRAWRTPRILEQDPSTSRAWMITVARHIVIDEVRSARRRHENPVAELPERVTDDHTDRLFDALLIQDALAAVSPEYREVVIAAYYRGRSVGEVAAELGIPEGTVESRMHYGLRALRLALQERGVTR*