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scnpilot_solids1_trim150_scaffold_2004_1

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(1..1425)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 468.0
  • Bit_score: 402
  • Evalue 7.40e-109
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 492.0
  • Bit_score: 361
  • Evalue 5.50e-97
  • rbh
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Patulibacter medicamentivorans RepID=H0EBD7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 468.0
  • Bit_score: 402
  • Evalue 5.30e-109
  • rbh

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
ATGGATCGGGAGATCTTCGACCACTTCCTCCGCGATGACGCCCGTCGCGGCCCGACGCCCGATGGCGCCTTCACCGGCGCCGCAGGCGGCGCCGCCTGCGGCGACCTCTCCCGGCTCTCCCTGGCCATCGACGGGGGCCGCATCGCCGCGGTCACTTTCGACACCGAGGGCTGCGGCGCCACTCGCGCGGCCACCGCGGCCGTCGCCGAGACCATCGAGGGCGCGACGGTCCTCGAGGCCGCGAAGCTCTCGATCGACGACGCCGAAGCGCTCCTGGGTGGCCTGGCCCCCGCAAAGCGCCACGCGGCCCAGCTTGCGACCGATGCGCTCCATCGCGCCCTGAGCGCCGCGGCGTCCTCCAGCCTCTCGCTGGACCCCTCGACGGCGCGGCGAAGCGAAGCAACTCCTGGCGCTCCGGCCGGCGTCGAGCAAGAGGCCGAAGCGGCGGACGCGCAGCGAGGGGGGCCGGGCTCGCCCACCTTAATAGCCCGTGAAGGTGGGCGAGTCCGGTCCCCCGAGCGCGTCGCCGTCGCTGTCAGCGGCGGCGTCGACTCCGCGGTGGCCGCCCTCCTCGAACGCGAGCGAGGCGCCGACGTGGTCGCGATCACCGTGAAGCTCTGGGCCGACCCGGAGACCGACGGGACCAAGGCCTGCTGCTCGCCCGAGGCCGTGCTCGGCGCGCGGGCCGTCGCCCACTCGCTCGACATCCCGCACTTCACGCTCGACCTCGAGGCCGACTTCCGTCGCCGCGTCGTCGAGCGCTGGGTCGCGGGCTACGCCGAGGGCCAGACCCCTAACCCCTGCATCCTCTGCAACGGCGAAGTGCGGCTGGCGGCGATGCTCGACCTCGCCCAGCGGCTCGGCGCCACGCGCCTGCTCACCGGCCACTACGCGCGGATCGCCTGGGACGCCGAGGGGCCGCTGCTTGCCGCCGGGGCCGATGCGGCCAAGGACCAGAGCTACATGCTCGCGGCGCTGCCGCCGGACCTCATCGGCCGCCTCGGCTTCCCGCTCACCGACATGACCAAGGACGAGGTACGCGCCGTCGCCGCCCGCCACGGCCTCTCGGTCGCCAAGAAGCCCGAGTCCCAGGACCTCTGCTTCCTCGCCGGCCAGGGCAAGCGCGGGTTCCTGCGCCGCCACGGCAACCTGGTCGACCGCGACGGCGCCGTCGTCGACCGCTCCGGCCGCACCCTCGGCCGCCACCGCGGCCACCACAACTTCACCGTCGGCCAGCGGCGCGGCATCGGCGTCTCGCTTAACGAGCCGGGATATGTCGTCGCCACCGACGCCGCCGCCAACACGGTCACCGTCGGCACCCGCGAGGACCTCGAAACGCGCCGCATCCACGTCCGTGACGCCGTCCTCCACCGCGACGGCGCCCGCGTCGACAACGTCCGCCTGCGCTACCACTCGGCCACCCTG
PROTEIN sequence
Length: 475
MDREIFDHFLRDDARRGPTPDGAFTGAAGGAACGDLSRLSLAIDGGRIAAVTFDTEGCGATRAATAAVAETIEGATVLEAAKLSIDDAEALLGGLAPAKRHAAQLATDALHRALSAAASSSLSLDPSTARRSEATPGAPAGVEQEAEAADAQRGGPGSPTLIAREGGRVRSPERVAVAVSGGVDSAVAALLERERGADVVAITVKLWADPETDGTKACCSPEAVLGARAVAHSLDIPHFTLDLEADFRRRVVERWVAGYAEGQTPNPCILCNGEVRLAAMLDLAQRLGATRLLTGHYARIAWDAEGPLLAAGADAAKDQSYMLAALPPDLIGRLGFPLTDMTKDEVRAVAARHGLSVAKKPESQDLCFLAGQGKRGFLRRHGNLVDRDGAVVDRSGRTLGRHRGHHNFTVGQRRGIGVSLNEPGYVVATDAAANTVTVGTREDLETRRIHVRDAVLHRDGARVDNVRLRYHSATL