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scnpilot_solids1_trim150_scaffold_1266_6

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(6523..6690)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Nocardiopsis lucentensis RepID=UPI00034818BE similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 55.0
  • Bit_score: 64
  • Evalue 3.10e-08
rpmD; ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 55.0
  • Bit_score: 64
  • Evalue 1.60e-08
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 55.0
  • Bit_score: 64
  • Evalue 7.30e-08

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Taxonomy

Nocardiopsis alba → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 168
GTGAAGATTTCCCAGACCAAGTCGCCCAACGGGACGAACCCGAAGCAGAAAGCGACTCTCAAGGCGCTGGGCCTGGGGCGGATCGGCAAATCGGTAGAGCGCAAAGACTCTCCGCAGCTCCAGGGCCAGCTTCGCGTCGTCTCGCACCTCGTCGAGGTGAGTGACTGA
PROTEIN sequence
Length: 56
VKISQTKSPNGTNPKQKATLKALGLGRIGKSVERKDSPQLQGQLRVVSHLVEVSD*