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scnpilot_solids1_trim150_scaffold_1266_22

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(14299..14649)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2RWY1_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 50.0
  • Bit_score: 73
  • Evalue 1.40e-10
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella bergeriae ATCC 700627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 50.0
  • Bit_score: 73
  • Evalue 1.90e-10
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 51.0
  • Bit_score: 69
  • Evalue 1.10e-09

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Taxonomy

Gemella bergeri → Gemella → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 351
ATGGACGCCCGCACGATCCTCATCCGCCCGGTGATCTCGGAGAAGTCCTACGCGCTGATCGCCGAGGGCAAGTACACCTTCCGGGTCGACGACCGCGCCCACAAGACCCAGATCGCGCAGGCGGTCGAAGAGGTCTTCGGGGTCGGCGTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGGTCCGGACCGCCAAGGTGCGGTCGAAGCCGAAGCGCCGCGGCCTCACCAAAGGCCGCACCCGCGCCTGGAAGAAGGCGATCGTCCAGGTCGCCCCGGGCGAGCGGATCGAGTTGTTCGAAGGCGGACAGACCGCCTAGGGATGGAGCTTTAG
PROTEIN sequence
Length: 117
MDARTILIRPVISEKSYALIAEGKYTFRVDDRAHKTQIAQAVEEVFGVGVXXXXXXXXXXXXXXXRGPDRQGAVEAEAPRPHQRPHPRLEEGDRPGRPGRADRVVRRRTDRLGMEL*