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scnpilot_solids1_trim150_scaffold_790_3

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(2956..4404)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F274_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 33.9
  • Coverage: 469.0
  • Bit_score: 190
  • Evalue 3.20e-45
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 469.0
  • Bit_score: 190
  • Evalue 1.00e-45
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50249.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.9
  • Coverage: 469.0
  • Bit_score: 190
  • Evalue 4.50e-45

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
GTGAGTCCGGGCAGGGGGCCGGGGCGCGAGAGCGTCGCGGCCGACGTGGAGATCGACGCGGTCGACGAGGTGCTGGAGGCGGTCGACCTGGACGAGGACGGGGCGACGCCGATCGAGGCGGCGGCGCGCAAACGGGTCGCGGTCGAGACCTTCGCCCACAACGAGGCGTCCCTGCGGCGGACCGCGCAGCGCTACTCGATCTGCGCCGACGACGCCGAGGAAGCGCTGCAGCGCGGGCTCGAGATCCTGCTCAACAAAGCGCCCTCCGAGGACCCGCGCCACCTGGTCCGCTGGACCCAGACCGTGGTCAAACACGAGGCGCTGGCGGTGCGCGCGGAGCGCGAGCGGACGCTTGCCGGGCCCGCTGCCGCGACCCCCGTGCCGGGGCGCGAAGACTGGGTCGCGATGCTGCCGGCCGAGGTGGCCGGGCCGGCCGAGCGGGCCGAGCGCCACGAGGCGATCGAGCGCAGCCGCGAGGCGCTGGCGACGCTGAAGCCGCAGGAGGTGCGCACGCTCGGCCTGCTCGCCGAGGGCTACTCCTACCGCGAGATCGCCGAGATCACCGGCTACTCCTCGACGAAAGTGAACCGCGCGATCGCCGAGGGACGCGAGCGGTTCCGCCACTTCCTCCTGCGCCGCGAGGGCGGCGCCCGGTGCAACGAGCTGGCGCCGCTCCTCTCCGCCTTCGCCGACGAGGAAGCGGAGGCGGCCGATGTCGTCACCCTGCGCGAGCACCTGCGCACCTGCCCCCACTGCCGGGCGACGCTGCGGGCCTACCGCGCCGCCCCTGGCGCCGCGGCGGCATTGCTGCCGATCGTGCCGCCCGCCCGCGGCGCCCTCCTCGGCCGCCTCCACGACGCCTACGCCGCGGTCGCGACGCGGGTCGGCGGCGGGTCGGGCGCCTCGGACTCGACCCTCGGCGGGATCGCGGCGACTGGCGGCACGCGGGGCGCCGGGATGGCGGCGCTCGCCAAGGCGCTGGCGATCTGCGCGGGGACGGTCGGCGGCGCCGCCGCCTGCGTGGCGACCGGGGTCGTCCCGGCGCCGCTGTTCGACTCGGCCGCGCACCATCAGGCCCCGCCGGCCAAGGTCGCCCACCACCAGCGGCACCGGGCCGAGGACCTGGAAACCCAGCTGCCGACTCCCTACGAAGTGGCGCCGACCACGGAAACCGGGGTCGAACCGGAACCGCAGCAGGCGGAAGCGACGCCGCCGGAAGAAGAACACCACGAGGAACCCGACCGGTCGAAGGCCGACCCGGAAAGGGCGCCGATCGAAGAAGCCATCTCCGCGACCCCGTCGAGCGAAAGCGGTGCGACCGAATACACCGAAGTGCTCGCCCCGCCGCCGGTCGAAGCGACGAGCTCGGCCTCTTCGTCGTCGTCTGGCGGCGGCGCCTCCTCGGGCTCTTCGTCGAGCGGCACCGCCGCCGGGGAGTTCGGGCCGTGA
PROTEIN sequence
Length: 483
VSPGRGPGRESVAADVEIDAVDEVLEAVDLDEDGATPIEAAARKRVAVETFAHNEASLRRTAQRYSICADDAEEALQRGLEILLNKAPSEDPRHLVRWTQTVVKHEALAVRAERERTLAGPAAATPVPGREDWVAMLPAEVAGPAERAERHEAIERSREALATLKPQEVRTLGLLAEGYSYREIAEITGYSSTKVNRAIAEGRERFRHFLLRREGGARCNELAPLLSAFADEEAEAADVVTLREHLRTCPHCRATLRAYRAAPGAAAALLPIVPPARGALLGRLHDAYAAVATRVGGGSGASDSTLGGIAATGGTRGAGMAALAKALAICAGTVGGAAACVATGVVPAPLFDSAAHHQAPPAKVAHHQRHRAEDLETQLPTPYEVAPTTETGVEPEPQQAEATPPEEEHHEEPDRSKADPERAPIEEAISATPSSESGATEYTEVLAPPPVEATSSASSSSSGGGASSGSSSSGTAAGEFGP*