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scnpilot_solids1_trim150_scaffold_1657_1

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(163..747)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YZY3_NOCFA similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 195.0
  • Bit_score: 176
  • Evalue 3.30e-41
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 195.0
  • Bit_score: 176
  • Evalue 1.00e-41
Putative transcriptional regulator {ECO:0000313|EMBL:BAD56258.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 195.0
  • Bit_score: 176
  • Evalue 4.60e-41

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Taxonomy

Nocardia farcinica → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGCAAGTGGCCAACGCAAGTGCAACGAAAGGGGAGAGGACGCGCGCCGCGATCCTCGACCACGCCGTCGACCTCGCCTCGGTCGAGGGCCTCGAGGGCCTGACGATCGGCCGCCTCGCGAGCGACCTGGGGATGAGCAAGAGCGGCCTCTTCCGCCACTTCGGCTCCAAGCAGGATCTGCAACTGGCGACGGTCGGCGCCGCCCGCGCCCGCTTCGTCGCCATGGTCATCGAGCCCGCGACCGCCGCCCCCGACGGCGCGCCCCGCCTGCGGGCGATGGCCGAGCACTACCTCGACTACCTCCACAGCTTCCCCGGCGGCTGCTTCTGGGGCGCCACCGCGAGCGAGTTCGACGACCGGCCCGGCCCGGTCCGCGACGCGATCGCCGCCTCCCTCGACGCCTGGATGGCGGAGCTGGTCCGCCAGGCGACTGCGGCCGGGATCGCCGACCCCGACCGCTACGCCTTCGAGCTCTACGCCGTCGTCATGGCCGCCAACGCCCGCTGGCGCCTGACCGGCGACCGCCGCACCTTCGACCTCGCCCGCGCCGCCCTGGCGCGCCTGGAGGCCGAACTGCCGGGTTAG
PROTEIN sequence
Length: 195
VQVANASATKGERTRAAILDHAVDLASVEGLEGLTIGRLASDLGMSKSGLFRHFGSKQDLQLATVGAARARFVAMVIEPATAAPDGAPRLRAMAEHYLDYLHSFPGGCFWGATASEFDDRPGPVRDAIAASLDAWMAELVRQATAAGIADPDRYAFELYAVVMAANARWRLTGDRRTFDLARAALARLEAELPG*