ggKbase home page

scnpilot_solids1_trim150_scaffold_1452_7

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 8316..9863

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 500.0
  • Bit_score: 384
  • Evalue 3.90e-104
ABC transporter related protein id=7720175 bin=CNBR_ACT species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 499.0
  • Bit_score: 431
  • Evalue 1.50e-117
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:EXG82736.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 498.0
  • Bit_score: 425
  • Evalue 1.50e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
TTGACCGAGAACGCGACCCCACCGCCCGCGGCCGGCCCCCGGCCGTTGCTCTCGGTGCGCCACGTCTCGAAGACGTACGGCGCCGTGCGCGCCCTCGACGACGCCTCGGTCGAGCTCGGCTCGGGCGAGATCCTCGGCCTCTGCGGCCACAACGGGGCCGGCAAGTCGACGCTGGTGAAGATCCTCACCGGCCAGGTCCGTCCCGACGCCGGCGAGATCTTCATGCAGGGTGAGTCGGTCGAGTTCCGCAACCCGCTCGAGGCCCAGGCCAAAGGGCTGGCGATCGTCGACCAGGAGCTTGCCCTCGCCCCCGACCTCTCGGTCGAAGAGAACCTCTTCCTCGGCAACTTCGACCTCTCGCTGCTGCGCCGCCCCCGCGCCGCGCGGCGGCGCGCCCGTGACCTGCTCGCCCGCATCGGCCTCAGCGTCGATCCGCGCCGCCCGCTCGCCGACCTCTCGATCGGCGAGCGCCAGCTGATCGAGATCGCCCGCCTGGTCGGCCGTGATGCCCGCGTGCTGATCCTCGACGAGCCGACCGCGACGCTGAGCGAGAACGAGATCGCACGCGTCTTCGCCGTCGTCCGCGAGCTGGTCCGCGAAGGCCGCGCGACGATCTTCGTCTCCCACCGGCTCGACGAGGTCCTCGACCTGTGCGACCGGGTGACGGTGCTCCGTGATGGGCGGATCGTCGCCTCGCGCAGCACCGCCGACATCGCCCACCGCCAGGAGCTGATCAAGATGATGATCGGCAAGGAGCTACCGCCACCGCAGCGCTCCGAGGCGGCCAGTGTCGCCGCCGGGGCCGGCGCGGCGATCACCGACCTGACGGTCCCTCCCGCCGTGGCGAGCTTCTCCCAGGACGTCAAGGGCGGGCAGATCGTCGGCCTCACCGGCCAGGTCGGCTCCGGCACCAGCCAGGTCCTGCGCGCGCTCGCCGGCCTCGAGCCGGACGCCCGCGGCGAGTTCACCCTCGACGGCAAGACGGTCCGGCTGGGCTCGCCCGCGACGGCGCTCCGGGCGGGCGTCGCCTTCGCCTCCAACGACCGCAAAGGCGAAGGCCTCTTCCTCGAACAGACGGTCGAAGACAACCTCGTCGCCACCCGCCTCACCTCGCTTTCGCGGGCTGGCTTCATCCGTGGCCGCGCTCTGCGCGAGACGGCGCGCCGCCTGATCGACTTCGTCAAAGTCGACCGCGAGCGGATCGGCGACACGGTCGAGCACTTCTCCGGCGGCAACCAGCAGAAGATCTTCCTCGGGCGTTGTCTCGACCGCCGGGACGTGAAGCTGCTGCTGCTCGACGAGCCGACCCGCGGCGTCGACGTCGCCGGCCGGGCCGAGATCCACCAGCTGATCCGCCAGGCCGCCCTGGCCGGGGTCGCCGTCCTCTTCGCCTCCACCGAGCTCGACGAGATCCTCGACCTCTCCGACCAGGTGGTGACGATGTTCGGCGGCGAGATCGTCGCCTCGCTCGCCCGCGCGGAAACCAACGCGGAGCTGATCTCCGCCGACATGACGATGAGCCACGAGCGCAAGGAGGCGACCCGATGA
PROTEIN sequence
Length: 516
LTENATPPPAAGPRPLLSVRHVSKTYGAVRALDDASVELGSGEILGLCGHNGAGKSTLVKILTGQVRPDAGEIFMQGESVEFRNPLEAQAKGLAIVDQELALAPDLSVEENLFLGNFDLSLLRRPRAARRRARDLLARIGLSVDPRRPLADLSIGERQLIEIARLVGRDARVLILDEPTATLSENEIARVFAVVRELVREGRATIFVSHRLDEVLDLCDRVTVLRDGRIVASRSTADIAHRQELIKMMIGKELPPPQRSEAASVAAGAGAAITDLTVPPAVASFSQDVKGGQIVGLTGQVGSGTSQVLRALAGLEPDARGEFTLDGKTVRLGSPATALRAGVAFASNDRKGEGLFLEQTVEDNLVATRLTSLSRAGFIRGRALRETARRLIDFVKVDRERIGDTVEHFSGGNQQKIFLGRCLDRRDVKLLLLDEPTRGVDVAGRAEIHQLIRQAALAGVAVLFASTELDEILDLSDQVVTMFGGEIVASLARAETNAELISADMTMSHERKEATR*