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scnpilot_solids1_trim150_scaffold_2879_9

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 6885..7166

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Neisseria flavescens NRL30031/H210 RepID=C0EPQ9_NEIFL similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 65.0
  • Bit_score: 69
  • Evalue 1.60e-09
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG32993.1}; TaxID=546264 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria flavescens NRL30031/H210.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 65.0
  • Bit_score: 69
  • Evalue 2.20e-09
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 68.0
  • Bit_score: 66
  • Evalue 5.60e-09

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Taxonomy

Neisseria flavescens → Neisseria → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGACGTTTTGCAGCGGTTTGGCGGGAATCTCCTGCGGATTCGGCAGGCGAGGAGGCTGAGCCAAGAGAGCCTCGCGGAACGCGCGGGCGTCCATCGGACCCAGATCAGCCTGTTCGAGACCGGTCAGCGTCAGCCGCTTCTCGAAACCTTGATCCGACTGGCCGGCGCGCTCGAAGTACCGCTACCGACGCTGCTCGAGGGGATCGTCTTCAGGCCCGGCCCCGGGAACGGCGAATTCGTCGTCTCCGACCCACCGGAGCTGCCGCGGGTGAGAGGCTAG
PROTEIN sequence
Length: 94
MDVLQRFGGNLLRIRQARRLSQESLAERAGVHRTQISLFETGQRQPLLETLIRLAGALEVPLPTLLEGIVFRPGPGNGEFVVSDPPELPRVRG*