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scnpilot_solids2_trim150_scaffold_122

Search features with annotation key words

Displaying items 91-99 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_122_91
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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100067..101827
-----------------
DNA (1761bp)
protein (587aa)
Putative oligopeptide ABC transporter,solute-binding protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DTF4_9NOCA
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT07691.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
D,D-dipeptide-binding periplasmic protein ddpA
scnpilot_solids2_trim150_scaffold_122_92
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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101973..102977
-----------------
DNA (1005bp)
protein (335aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00037C7F0E rbh
Contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ18935.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.;"
dppB; ABC transporter permease
scnpilot_solids2_trim150_scaffold_122_93
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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102974..105091
-----------------
DNA (2118bp)
protein (706aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003605AF8
Uncharacterized protein {ECO:0000313|EMBL:KHL13430.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
oligopeptide/dipeptide ABC transporter ATPase
scnpilot_solids2_trim150_scaffold_122_94
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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105081..106448
-----------------
DNA (1368bp)
protein (456aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003785E1B rbh
oligopeptide/dipeptide ABC transporter ATPase rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEW97525.1}; Putative cell wall oligopeptide ABC transporter (ATP binding protein) (Modular protein) {ECO:0000313|EMBL:CCB77849.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
scnpilot_solids2_trim150_scaffold_122_95
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(106452..107597)
-----------------
DNA (1146bp)
protein (382aa)
Transcriptional regulator, LacI family n=1 Tax=Frankia sp. EUN1f RepID=D3CTH5_9ACTO rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACV77607.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_122_96
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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107635..108489
-----------------
DNA (855bp)
protein (285aa)
Peptidase M22 glycoprotease n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCP3_NAKMY
peptidase M22 glycoprotease
Peptidase M22 glycoprotease {ECO:0000313|EMBL:ACV77608.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_122_97
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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108486..109052
-----------------
DNA (567bp)
protein (189aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCP4_NAKMY
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ACV77609.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_122_98
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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109049..110137
-----------------
DNA (1089bp)
protein (363aa)
glycoprotease family metalloendopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] rbh
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamure
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCP5_NAKMY rbh
scnpilot_solids2_trim150_scaffold_122_99
unknown

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110325..110396
-----------------
DNA (72bp)
protein (24aa)

This feature has no annotations

Displaying items 91-99 of 99 in total

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