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scnpilot_solids2_trim150_scaffold_391

Search features with annotation key words

Displaying items 31-53 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_391_30
unknown

Not on your lists

comp(28215..28361)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_391_31
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28468..28749)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R176_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEE43355.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_391_32
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28870..29187)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003676CE3
Uncharacterized protein {ECO:0000313|EMBL:AJD40485.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_391_33
unknown

Not on your lists

comp(29192..29371)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_391_34
unknown

Not on your lists

29463..29690
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_391_trna_1
unknown

Not on your lists

comp(29871..29952)
DNA (82bp)
transferRNA Leu
scnpilot_solids2_trim150_scaffold_391_35
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30060..30641
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030DF26A
dedA; DedA family protein
DedA family protein {ECO:0000313|EMBL:BAF86460.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_391_36
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30659..31183
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003716B4F
Putative uncharacterized protein {ECO:0000313|EMBL:EEE43937.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
DsbB-like disulfide oxidoreductase
scnpilot_solids2_trim150_scaffold_391_37
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31212..31781)
DNA (570bp) protein (190aa)
Restriction endonuclease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT92_9RHIZ rbh
HNH endonuclease domain protein {ECO:0000313|EMBL:KFC73272.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HNH endonuclease rbh
scnpilot_solids2_trim150_scaffold_391_38
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31902..32783)
DNA (882bp) protein (294aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KFG67687.1}; EC=1.1.1.157 {ECO:0000313|EMBL:KFG67687.1};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KLS5_9RHIZ
scnpilot_solids2_trim150_scaffold_391_39
bacterium YEK0313, Bacteria

Not on your lists

comp(32874..33818)
DNA (945bp) protein (315aa)
electron transfer flavoprotein subunit beta n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314F15B rbh
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:CEJ10932.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
electron transfer flavoprotein alpha subunit
scnpilot_solids2_trim150_scaffold_391_40
bacterium YEK0313, Bacteria

Not on your lists

comp(33818..34567)
DNA (750bp) protein (250aa)
Electron transfer flavoprotein beta-subunit n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GFR2_9BRAD
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:CEJ10931.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit
scnpilot_solids2_trim150_scaffold_391_41
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34721..35413)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000309AF60
Rhomboid family serine protease {ECO:0000313|EMBL:BAQ18755.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
rhomboid family protein
scnpilot_solids2_trim150_scaffold_391_42
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35429..36007)
DNA (579bp) protein (193aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000308FD0B
hypothetical protein
ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:ELT50049.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
scnpilot_solids2_trim150_scaffold_391_43
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36032..36622)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UAF2_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA16473.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_391_44
bacterium YEK0313, Bacteria

Not on your lists

comp(36718..36909)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037A4672
Uncharacterized protein {ECO:0000313|EMBL:CEJ13157.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_391_45
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37021..39699)
DNA (2679bp) protein (893aa)
TIGR02302 family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTG1_9RHIZ rbh
TIGR02302 family protein {ECO:0000313|EMBL:EIM27253.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_391_46
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39790..41067)
DNA (1278bp) protein (426aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
lysA; diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFG7_PHEZH rbh
scnpilot_solids2_trim150_scaffold_391_47
unknown

Not on your lists

comp(41081..41551)
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_391_48
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41625..42629)
DNA (1005bp) protein (335aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
argininosuccinate lyase n=1 Tax=Methylocystis parvus RepID=UPI0002EADB65
scnpilot_solids2_trim150_scaffold_391_49
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42639..42839
DNA (201bp) protein (67aa)
Response regulator receiver n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP26_9BURK
Response regulator receiver {ECO:0000313|EMBL:EIK90966.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
two component LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_391_50
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42911..43762
DNA (852bp) protein (284aa)
methylenetetrahydrofolate dehydrogenase (nadp(+)) (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] rbh
Bifunctional protein FolD n=2 Tax=Alicycliphilus denitrificans RepID=E8U122_ALIDB rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids2_trim150_scaffold_391_51
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43759..44454
DNA (696bp) protein (232aa)
oligopeptidase A (EC:3.4.24.70); K01414 oligopeptidase A [EC:3.4.24.70]
Oligopeptidase A n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCB6_ALIDK
Oligopeptidase A {ECO:0000313|EMBL:GAO23413.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying items 31-53 of 53 in total

View Taxonomy