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scnpilot_solids2_trim150_scaffold_208_21

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 22724..22972

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7INM0_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 80.0
  • Bit_score: 156
  • Evalue 1.10e-35
RNA chaperone Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 80.0
  • Bit_score: 156
  • Evalue 3.60e-36
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 80.0
  • Bit_score: 156
  • Evalue 1.60e-35

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Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGCGGCGGACCGCAATCAGAATTTGCAGGACACGTTTCTCAATAATGTTCGCAAGAATAAGATCCCGCTGACGATCTTTCTGGTCAACGGTGTCAAGCTGCAAGGGGTCGTAACCTGGTTCGACAACTTCTGTGTGCTGCTGCGCCGCGACGGACATTCTCAGCTGGTCTACAAACACGCGATCTCGACGATCATGCCGGGCCATCCGTTGCAGCTCTTCGAGCCGGCGGATGATGTCGACGGCTGA
PROTEIN sequence
Length: 83
MAADRNQNLQDTFLNNVRKNKIPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHAISTIMPGHPLQLFEPADDVDG*