ggKbase home page

scnpilot_solids2_trim150_scaffold_1582_3

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(2399..3055)

Top 3 Functional Annotations

Value Algorithm Source
outer membrane protein id=12495461 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 219.0
  • Bit_score: 417
  • Evalue 7.30e-114
  • rbh
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 198.0
  • Bit_score: 136
  • Evalue 1.30e-29
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 222.0
  • Bit_score: 369
  • Evalue 2.40e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
TTGCGCACCCCTTTATTTGTCAGCACCCTCGGAGCCATCCTGATGTCTGCCAGCGTTGTAACGGCCTACGCGGCAGGAGGCGTTTACTACGATCCTTCCAATGCTGCCAGCCCCACCGGAAAAACGACCGGCTACGAGCTTTACCGGACGATCGGCTGTCCGGGCCGCGGACTTTTGGATACCCCTTGCGCGGTCCCTGCACCGCCGGCACCGGTCGCGGCGGCTGAACCCGCACCTGCCCCCGAACCGGCCTATGTCGCACCGCCCGCGCCCGCGCCGGCCCCCTACGTCGCACCCGCACCCGCGCCCGTGCCCCCGCAGAAACTGGAACTGGAAGGCGTGAATTTTGATTTCGACAAGGCCACGCTGCGCCAGGAAGATATCGCCATCATCGACAAGAATGTCGCCGGGCTGGATAAATGGGGCAATGTGAACATCGAAGTCGCGGGCCACACAGACAGCCGGGGCAGTGAGCAATACAACATGAAGCTGTCCCAGCGGCGCGCAGAGACCGTTCGCAACTACCTGATCAGCAAGGGCATCGCCGCGGACCGCCTGACTGCCAAGGGCTACGGAGAAGCCCAGCCGATCGCAGACAATGCGACGGAAGAAGGACGCTTCAAGAATCGTCGTGTCGAACTGATCGAAAAACGCTGA
PROTEIN sequence
Length: 219
LRTPLFVSTLGAILMSASVVTAYAAGGVYYDPSNAASPTGKTTGYELYRTIGCPGRGLLDTPCAVPAPPAPVAAAEPAPAPEPAYVAPPAPAPAPYVAPAPAPVPPQKLELEGVNFDFDKATLRQEDIAIIDKNVAGLDKWGNVNIEVAGHTDSRGSEQYNMKLSQRRAETVRNYLISKGIAADRLTAKGYGEAQPIADNATEEGRFKNRRVELIEKR*