ggKbase home page

scnpilot_solids2_trim150_scaffold_2171_12

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(7684..7956)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator of psp operon n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL48_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 90.0
  • Bit_score: 147
  • Evalue 5.80e-33
DNA-binding transcriptional activator of psp operon {ECO:0000313|EMBL:EIL87939.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 90.0
  • Bit_score: 147
  • Evalue 8.20e-33
pspC; DNA-binding transcriptional activator of psp operon similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 81.0
  • Bit_score: 62
  • Evalue 7.80e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGAACGCTACACGGGACGGAGATCGTCGACGCCCGCTCCATCGCGATTCGGAACGCGGCCTGATTCTCGGCGTATGCACCGGCATCGCCGAGAGCTTCGACTGGCCGGTATGGCTGACCCGCGCCGGTGCGCTGGCGCTGGGCTGGTGCTTCCCGGTGTCCGCCGTGGTGGCCTACGTCGTAGCCGCGCTGGTCATGCCGGAGCGGCCGCTGCGTTACTGCGGCGACGGCGACGAGCGCAGCTACTGGCAGTCGACGCGTCACCGGAGCTGA
PROTEIN sequence
Length: 91
MNATRDGDRRRPLHRDSERGLILGVCTGIAESFDWPVWLTRAGALALGWCFPVSAVVAYVVAALVMPERPLRYCGDGDERSYWQSTRHRS*