ggKbase home page

scnpilot_solids2_trim150_scaffold_984_12

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(9345..10244)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Afipia RepID=D6V0W2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 302.0
  • Bit_score: 337
  • Evalue 1.30e-89
Uncharacterized protein {ECO:0000313|EMBL:EKS30469.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 302.0
  • Bit_score: 337
  • Evalue 1.80e-89
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 299.0
  • Bit_score: 295
  • Evalue 2.40e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
TTGCGTCTGGCGGTCGTAACGTCACAGCACCGCAGCCTTAGACAGGCGGCGGAAGCCCTGAACATACGCCAATCGACCTTGAGCCGCCGGCTGCACGAGATCGAGCGCCAGCTCGGCGTGGTGTTGTTCGAAAGGACGAACGGCGGCACCCACCTCACCACAGTGGGGCTGGAGTTCGTCGCGAGCGCCAAACGGATCCTCGATGACGTGGATACGGAGCTCCGACGGATCAAAAGCAGAAGCCGCGGCGAACTCGGCCTCTTGACGATCGGCGTTCATGCCTCCCCCTCGGCGGGACACATGCACGCGACGCTCGTCGAATACCATCGCCGCTTTCCGGATGTGGATGTACGCACCGTCGACGGCAGCCAGGATCGGCTGCTATGTGCTCTGGCCGGGAACGCTGTCGATATTGCGATCATGACGGGCCATGCGGCCGCCTGGGACGGCCGGATGCTCCCGCTTTGGAGTGAACGGGTGATCGTGTCTTTCCCGCAGCATCATCCGCTTGGCCAGAATCCGAGGATTCGTTGGGCGGATCTTGCGAACGAAAAGTTTCTCGTCCCGCAGCAAGGCCCTGGGCCGGAGTTGGAGGGGTTGCTCGCGGCGAAGCTTCATCATGCCGTCGGCTCCCAGCAGATCGTCCATCAGGACTCGTCGCTGGACAGACTGTTGAGCCTGGTCAGTGCGAACTATGGCACGCTTCTGATGTTCGAGGGCGCGACGGGGGTCCGTCACGAAGGTGTCGTCTACCGGGAAGTCTGGGACGATGACGGTCCTACCCAAATCAAATTCATGGCGTATTGGCGAGACGCGAACAGCAACCCGGCGTTGGGGTCGTTCCTGGCGATGCTGCGCGAACACTACCCCGATTTCTCGGCCGAACCGCCACCGACCTGA
PROTEIN sequence
Length: 300
LRLAVVTSQHRSLRQAAEALNIRQSTLSRRLHEIERQLGVVLFERTNGGTHLTTVGLEFVASAKRILDDVDTELRRIKSRSRGELGLLTIGVHASPSAGHMHATLVEYHRRFPDVDVRTVDGSQDRLLCALAGNAVDIAIMTGHAAAWDGRMLPLWSERVIVSFPQHHPLGQNPRIRWADLANEKFLVPQQGPGPELEGLLAAKLHHAVGSQQIVHQDSSLDRLLSLVSANYGTLLMFEGATGVRHEGVVYREVWDDDGPTQIKFMAYWRDANSNPALGSFLAMLREHYPDFSAEPPPT*