ggKbase home page

scnpilot_solids2_trim150_scaffold_5033_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 2..334

Top 3 Functional Annotations

Value Algorithm Source
Major anaerobically induced outer membrane transmembrane protein (Fragment) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGC1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 110.0
  • Bit_score: 196
  • Evalue 1.00e-47
dissimilatory nitrite reductase (NO-forming), copper type apoprotein similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 110.0
  • Bit_score: 196
  • Evalue 5.50e-48
Major anaerobically induced outer membrane transmembrane protein {ECO:0000313|EMBL:EIL98512.1}; Flags: Fragment;; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 110.0
  • Bit_score: 196
  • Evalue 1.40e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
CTGTTCACCGGCACCTGCTCGGTGTGCCACCAGGCGAACGGCGAAGGCCTGCCGAACGTGTTCCCGCCGCTGGCCAAGTCGGACTACCTGGCCGCCGACCCGAAGCGGGCGATCGGGGTGGTACTGCACGGCCTGCAGGGCAAGGTCACGGTGAACGGCCACGAGTACGACTCGGTGATGCCGCCGATGAACCAGCTGACCGACGACGAGGTGGCGAACATCCTGACCTACGTGCTGAACAGCTGGGGCAACCCGGGTGGCCAGATCAGCAAGGAAGAGGCGGCCAAGGTGCGTGCAGCGCCGGCGCCCGCCACGGCATCGCCGGGACACTGA
PROTEIN sequence
Length: 111
LFTGTCSVCHQANGEGLPNVFPPLAKSDYLAADPKRAIGVVLHGLQGKVTVNGHEYDSVMPPMNQLTDDEVANILTYVLNSWGNPGGQISKEEAAKVRAAPAPATASPGH*