ggKbase home page

scnpilot_solids2_trim150_scaffold_3155_9

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5651..6157)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 168.0
  • Bit_score: 326
  • Evalue 1.30e-86
  • rbh
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 168.0
  • Bit_score: 326
  • Evalue 1.80e-86
transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 166.0
  • Bit_score: 308
  • Evalue 1.50e-81
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAGCCGCTGGCGTCCGCCCTCGCCCGGCTCCACCGCGATCGTCACCCGCGAGGGTTTCGAGCGGCTGAAGGCCGAGCTCGACCAGCTGTGGCACGTGCTGCGCCCGGAGGTGGTGAAGGCGCTGGCCGCGGCCGCCGCCGAGGGCGACCGCTCGGAAAACGCCGAGTACACCTACCGCAAGAAGCAGCTCGGCGAGATCGACCGCCGCGTGCGCTACCTCAGCAAGCGCATCCCGTCGCTCAAGGTGGCCGAAGGCGTACCGGGCGACCGCCAGGCAGTGTTCTTCGGCGCCTGCATCGAACTGGAGAACGTCGCCACCGGCGAGGTTCACCGCTACCGCATCGTGGGCCCGGACGAGACCGATGCGAAACGCGGCTGGATCAGCGTCGACTCGCCGCTGGCGCGGGCAGTGCTGAAGAAGCACATCGACGACGAGTTCAGCGCCGAGCTGCCGGGCGGATTGACCACGTTTGCCGTGCTCGCGGTCGACTACGACGGAGCCTGA
PROTEIN sequence
Length: 169
MSRWRPPSPGSTAIVTREGFERLKAELDQLWHVLRPEVVKALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRIPSLKVAEGVPGDRQAVFFGACIELENVATGEVHRYRIVGPDETDAKRGWISVDSPLARAVLKKHIDDEFSAELPGGLTTFAVLAVDYDGA*