ggKbase home page

scnpilot_solids2_trim150_scaffold_14119_2

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(653..1444)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU67_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 3.30e-129
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KGB57295.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 263.0
  • Bit_score: 485
  • Evalue 4.80e-134
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 1.00e-129
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGAAGCGCACCCACCTGCCGCTGAACGCCCTGCGCGTGTTCGATGCCGCTGCCCGGCACCTCAGCTTCACGCGCGCCGCCGACGAACTGGCGGTGACTCCCGCCGCCGTCGGGCAACAGATACGCGCGCTGGAGGATATGCTCGGCGTCGTCCTGTTCCGCCGCACCCCGAAGGGGCTGGAACTGACGGGAGAGGCGACCGCCGGGCTCGACGCGCTGCGGCAGGGGTTCCTGATGTTCGAGGAATCGGTGCGCGCGATGCAGGCGGGCCAGTCGTCGCAATCGCTGACGATCGCCGCGCCGCGCGACCTGACCGCCAAATGGCTCGCGCCCAGGCTCGCGCGTTACAGCCAGCAGGCGCCCGACGTCCGCTTCACGCTGGTGTCGGCCGACGACGGCATCGACTTCACCGAGGCGAACCTCGACCTCGCGATCTTCTGGACCGACGGCGCCGGCGAGCATGAGGGCGTGCCGCTGTCCGAAGCGCATATGGTGACGGTCGCGGGACACGGCAGCGAGAGCGAGACGCGCATCGCGTGGCCCGGCTGCCCGGTCGAGGACGGCGAGCCCGCGCTGCGGCTCGGCGATGCGGGCCTTGCGATCGACGCCGCGGCGAACGGGCTGGGGCAGGCGAATGTCCCGGCGATGCTGGCGGAGGCCGATCTGGCGGCGGGGCGCGTCCGGCTGGTGCGCGAGCCTTTCGCCGTGAAGCGCGGCTACTGGCTCGTCGCCCCCTTGCCGCAATGGCGGCAGGCGAAGGTCAAGGCGCTGGTGGCGGCGCTGACGGCGTAA
PROTEIN sequence
Length: 264
MKRTHLPLNALRVFDAAARHLSFTRAADELAVTPAAVGQQIRALEDMLGVVLFRRTPKGLELTGEATAGLDALRQGFLMFEESVRAMQAGQSSQSLTIAAPRDLTAKWLAPRLARYSQQAPDVRFTLVSADDGIDFTEANLDLAIFWTDGAGEHEGVPLSEAHMVTVAGHGSESETRIAWPGCPVEDGEPALRLGDAGLAIDAAANGLGQANVPAMLAEADLAAGRVRLVREPFAVKRGYWLVAPLPQWRQAKVKALVAALTA*