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scnpilot_solids2_trim150_scaffold_17310_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(1..1503)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 502.0
  • Bit_score: 774
  • Evalue 2.90e-221
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 502.0
  • Bit_score: 774
  • Evalue 1.30e-220
transcription-repair coupling factor n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036AA733 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 502.0
  • Bit_score: 777
  • Evalue 8.30e-222

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
CCCGGCCGCGAAGTGCCGATGGACGATGCCCATGTGCAGCGCGCGCTGGAAGCGCTGCGCGAACGCTTCGACATCGACACCCGGCGCAGCGCGCTGGTGCAGGACCTCAAGGCCGGGCTGGCGCCGGCCGGCGTGGAGTACTACCTGCCGCTGTTCTTCGCCGCGCAGCGCGGCGGCGCCGGCAGCACGGAAACCCTGTTCGACTACCTCGGCACGAACGCGCTGCCGCTGGTCTGCGACGGCGCGCTGGAAGCCGCCGAGCACGCCTGGAAGCAGATCGGCGAGCGTTTCGAGCAGTTGCGCCACGACATCGAACGCCCGCTGCTGCCGCCGGCCGAGCTGTGGCTGTCGCCGGATGCGCTGCGGGAAACCCTGAACCGCTTCGAGCGCATCGAAGTCTGCGGCGCCGAGCACCCGCGCCATGGCGATGCGCAGCCGCTGCCGGTGCAGCCGGCGCCGGCGCTGCCGTTGACCGTGAAGGACCAGCCTGCGGGGCAGGCACTGCGTGATTTCCTGTCGAGCTATCCCGGCCGCGTGCTGGTAGCCGCGGATTCCGCCGGCCGCCGCGAGGCGCTGCTGGAAGTGCTGCAGGCGGCAGGGTTGAAACCGGTGGTGAGTGAAAACTGGCCGGCCTTCGCCGCCAGCGACACCCGCTTCGCCATCACCGTCGCCCCGTTCGACGACGGCTTCGCGCTCGACGCCCCGCAAACGGCCGTCCTGACCGAACGCCAGCTGTTCCCCGAGCGCGCCTTGCAGCCGCGCCGTCGCAGGCGCGCGGGACGCGAACCGGAAGCGATCATCCGCGACCTCGGCGAGCTGACCCAGGGCGCGCCGATCGTCCACGAGGATCACGGCGTCGGCCGCTACCGCGGGCTGGTGGCGATGGACGTCGGCGGCATGCCCGGCGAATTCCTCGACATCGAATACGCCAAGGGCGACCGCCTGTACGTGCCGGTGGCGCAGCTGGACCGCATCAGCCGCTATTCCGGCGCCAACCCCGACACCGCGCCGCTGCACAACCTTGGCGGCGAGCAGTGGGCGAAGGCGAAGAAGAAGGCCGCCGACAAGGTCCGTGACGTTGCCGCCGAGCTGCTGGAGATCCAGGCAAAGCGCCATGCACGGCAGGGCCTGGCCATCGACGTGGACCGGGCGATGTACGAACCGTTCGCCGCCACGTTCCCGTTCGAGGAAACCCCCGACCAGCACGCCGCCATCGAAGCGGTGCTGCGCGACCTAGCCTCCTCGCAGCCGATGGACCGCGTGGTCTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTCGCGGTGCGCGCCGCCTTCGCCGCCGCCAGCAGCGGCAAGCAGGTCGCGGTGCTGGTGCCGACCACCCTGCTGGCCGAGCAGCACTACCGCAACTTCCGCGACCGCTTCGCCGACTGGCCGCTGAAGGTGGAAGTGCTGTCGCGCTTCAAGTCGAAGAAGGAAATCGAAGCGGAACTGCAGAAGCTGGCCGAAGGCAAGCTCGAC
PROTEIN sequence
Length: 501
PGREVPMDDAHVQRALEALRERFDIDTRRSALVQDLKAGLAPAGVEYYLPLFFAAQRGGAGSTETLFDYLGTNALPLVCDGALEAAEHAWKQIGERFEQLRHDIERPLLPPAELWLSPDALRETLNRFERIEVCGAEHPRHGDAQPLPVQPAPALPLTVKDQPAGQALRDFLSSYPGRVLVAADSAGRREALLEVLQAAGLKPVVSENWPAFAASDTRFAITVAPFDDGFALDAPQTAVLTERQLFPERALQPRRRRRAGREPEAIIRDLGELTQGAPIVHEDHGVGRYRGLVAMDVGGMPGEFLDIEYAKGDRLYVPVAQLDRISRYSGANPDTAPLHNLGGEQWAKAKKKAADKVRDVAAELLEIQAKRHARQGLAIDVDRAMYEPFAATFPFEETPDQHAAIEAVLRDLASSQPMDRVVCGDVGFGKTEVAVRAAFAAASSGKQVAVLVPTTLLAEQHYRNFRDRFADWPLKVEVLSRFKSKKEIEAELQKLAEGKLD