ggKbase home page

scnpilot_solids2_trim150_scaffold_24015_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 3..1178

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFZ3_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 389.0
  • Bit_score: 422
  • Evalue 5.30e-115
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EHQ26281.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 389.0
  • Bit_score: 422
  • Evalue 7.40e-115
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 389.0
  • Bit_score: 413
  • Evalue 7.70e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1176
CAGGAGCACCTGTACCGGGATGCCGCTGCCGGGGATACGGCTTCCCTGGCTGACCTGCACTGGCGGGAAGTATTTACGGATCCTCACCTGCAGCAGCTTATAGAAGAGGCCCTGCAGCATAACTATGACCTGAAAAATGCCGTATTGCAGATTGCACAGGCCGAGGCTACCCTGATGCAGAGCCGTTGGGCGCTCTTCCCTACGCTGAGCTTTGCTCCCCAGATCAACCATTCCAAGACGTCCAGGGCTGCCCTGAACTTACCCCCAACGGTCAATATACGCCTGAGGACCACCACCATACAGCTGGGCTTTTCCAGCACCTGGGAGCTGGATGTATGGGGTAAGCTGGCGAGCGGCAGAAGAGCCAGCCTGGCCGGTTACTGGCAGGCCGATGCCACCCGGAAAGCAGTGGAAACTTCACTGATCGCCAATGTGGCCGGTATGTATTACACCCTGCTGGCGCTGGATGAGCAGCTGGCCATTACGGAATCTACCGTCCAGATACGGGAGAAGACCATGAACTCTATGAAAGCCCTTAAAGAGGCTGCCGTAGTGACCGGTGCCGCCGTTGTGCAAAGTGAGGCGAACTGGTATGCGGCGCAGGTGAGCATACCCGACCTGAAGCAGAATATCCGGGAAACAGAAAACGCTTTATCGGTATTGCTGGGACGGACGCCTCAGCCTGTGGCGAGAGGCAAGCTGACAGATGCCGTTACGGAGCACCGGATCGCTGCCGGGGTGCCGGTACAGCTGCTGACCAGGAGACCGGATGTGCAGGCGGCGGAGTTTGCCTTCCGTAAAGCCTTTGAGAATACCAATGTGGCGAAGGCCCAGTTTTATCCGAGCTTTACCATTACCGCGGCCAATGCCGGTCTCAGCGCCCTGACGCATAATAATCTTTTTTCAGAATCCATTTTTTATAATTTTATCGGGGGGCTTACGCAGCCTATCCTGAACCGCGGCGCCATCAGGGCAAACCACCGGATCGCCAATGCGCAGCAGGAGCAGGCCTGGAATACCTTCCAGAAGACCATCCTGACAGCGGGCCAGGAGGTGTCCGATGCCCTGTTTGCCTACAGCGCCGGCGTGAATAAAATGGAAGCCCGGCATAAGCAGATAGCTGCGCTCGAAAAGGCGGTACATTATAATATGCAGTTGCTGGAATACAGCAGCACT
PROTEIN sequence
Length: 392
QEHLYRDAAAGDTASLADLHWREVFTDPHLQQLIEEALQHNYDLKNAVLQIAQAEATLMQSRWALFPTLSFAPQINHSKTSRAALNLPPTVNIRLRTTTIQLGFSSTWELDVWGKLASGRRASLAGYWQADATRKAVETSLIANVAGMYYTLLALDEQLAITESTVQIREKTMNSMKALKEAAVVTGAAVVQSEANWYAAQVSIPDLKQNIRETENALSVLLGRTPQPVARGKLTDAVTEHRIAAGVPVQLLTRRPDVQAAEFAFRKAFENTNVAKAQFYPSFTITAANAGLSALTHNNLFSESIFYNFIGGLTQPILNRGAIRANHRIANAQQEQAWNTFQKTILTAGQEVSDALFAYSAGVNKMEARHKQIAALEKAVHYNMQLLEYSST