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scnpilot_solids2_trim150_scaffold_21815_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 2..544

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with HTH domain n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QV65_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 176.0
  • Bit_score: 113
  • Evalue 3.20e-22
Response regulator protein {ECO:0000313|EMBL:AJC79789.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 173.0
  • Bit_score: 123
  • Evalue 3.30e-25
Regulatory protein, LuxR, putative similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 179.0
  • Bit_score: 86
  • Evalue 1.30e-14

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGCTCGTTGGCCGTGACCGCAAGGTCATTTGTCCCAACAGAACGGCAGAATCCCTATTGCAAGGCGACGTCAGACTTTCTCAGGGAAGAATCGTTTCGGTCGACCCGGCCGCGACCGCTGCGCTCGACCGAGCAATCTTCGACCTGCTTTACGATCGTGAAGCCGGAGGCGTCTCCAAACCCGTCAAGCTTACACGGCGCGAACAGAGCCCATTGCTCGCCTATCCGGGGCGCGTGTCGTCGATGGTTTCAAATCCACTGGCCGATAGCCAAGCCATCGTTGTTTTGGTGGACCCAGACAAGAGAAAGACCATTCAGCCCGCGACACTGCGGCACGCTTTCGAAATGACGGAGTCCGAGGCTCGCTTAGCGGTTATGCTCGGCTCCGGTCTCGTTCTCGACGAGGCTTGCGAGCGATTAAAAATCGCCAAGGAAACTGGACGCAACCACCTGAAGAACGTGTTCGGTAAGACGGGCGCTCATCGCCAAGCCGATCTTGTGATGATGGTGCAGTCGTTGCTCGCCCAGGATTGTGATCAATAG
PROTEIN sequence
Length: 181
VLVGRDRKVICPNRTAESLLQGDVRLSQGRIVSVDPAATAALDRAIFDLLYDREAGGVSKPVKLTRREQSPLLAYPGRVSSMVSNPLADSQAIVVLVDPDKRKTIQPATLRHAFEMTESEARLAVMLGSGLVLDEACERLKIAKETGRNHLKNVFGKTGAHRQADLVMMVQSLLAQDCDQ*