ggKbase home page

scnpilot_solids1_trim150_scaffold_1465_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 5323..7956

Top 3 Functional Annotations

Value Algorithm Source
hrpB; ATP-dependent RNA helicase (EC:3.6.1.-); K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 887.0
  • Bit_score: 978
  • Evalue 1.00e-282
  • rbh
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VW24_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 877.0
  • Bit_score: 1344
  • Evalue 0.0
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL91415.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 877.0
  • Bit_score: 1344
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2634
ATGCAGCGGATGACTGCGCCCGATTTCCCGATCCTCCCGTTGCTGCCCGAGATCCGCGCCGCGCTCGCGGCAAATCCGCGGCTGGTGCTGGAGGCGCCGCCCGGCGCCGGCAAGACCACTCAGGTGCCGCTGGCCCTGCTCGATGCGCCGTGGCTGGCCGGCCGCAGGATCGTGATGCTGGAACCGCGCCGTCTCGCCGCGCGCGCCGCCGCGCAGTTCATGGCGACGCAGCTCGGCGAGCCGGTCGGGCAGACGGTGGGCTACCGCATTCGCTTCGAGTCGAAGGTGAGCGCTGCCACCCGCGTCGAGGTGGTCACCGAAGGCATCCTCACCCGGCTGATCCAGGCCGATCCCGAACTGGCCGGCATCGGCGCGATCATCTTCGACGAGTTCCACGAGCGCCACCTGGCCGGCGACCTCGGCGCCGTGCTCGCGCTCGACGTGCAAGCCACCTTGCGGCCGGACCTGCGCCTGCTGCTGATGTCGGCCACGCTGGATGGCGAGCGCATCGCCGGCTGGCTCGACGCGCCGCGCCTTTCCAGCCCCGGGCGCAGCTTCCCGATACGCATCGAACATCCGCCGGCGCGCGCGCAGGAAAGCGCCGAGCAGCATCTCGCCCGCACCGTGCGCCAGGCGCTCGATGAAACCGACGGCGACGTGCTGGTCTTCCTGCCCGGTCGGCGCGAGATCGCGCGAACGCAGGCGCTGCTGGAGAGAATGCTCCCCTCCCCCTTCGGGGGAGGGGTTGGGGGAGAGGGTGCGGTCGGAGCCGAGCGCCCCGCTCCGCCCGTACCCTCTCCCGCCCCTAAAGGGTCACCCTCTCCCGGAGGGAGAGGGGAACAAATCGACATCGTGCCCCTGCACGGCGAGCTGTCCCTCACCGAGCAGCAATACGCCCTGGCCCCGGCCGAACCCGGCACGCGCCGCATCGTGCTGGCCACCAACGTGGCCGAATCGAGCATCACCTTGCCCGGCATCCGCGCGGTGGTCGACAGTGGCCTGGCGCGCGAGCCGCGCTTCGATCCGCACTCCGGCTTCACCCGGCTGGAGACGGTCACCATCTCGCAGGCCTCGGCCGATCAGCGCGCCGGCCGCGCCGGTCGCGTCGCGGCGGGCGTGGCGTATCGGCTGTGGCCGCAGAGCCGCCGGCTGGAGCGCAGCCGTGGCGCGGAGATCGCACAGGCGGAGCTGTCCGGCCTGGCGCTGGAGCTGGCGGCCTGGGGTGTCACGGCGGCGGATGGCGGCGACCTGGCCTGGCTCGACCCGCCGCCGCCCGGCGCGCTGGCCCAGGCGCGCGAACTGCTGCAGGCACTCGATGCGCTCGACCGCGACGCATGCATCACCGCGCTGGGTCGGCGCATGCTGGAGCTGGGCGCCAGCCCGCGGCTGGCCGCCGCGGCGCTGCGCGCGCCGCACGAACAACGCGCCGTGGTCGCCGACCTGCTGGCCCTGCTGGAGGCGCGCTCGCCGTTGCGCGGGGCGCAGGCGCGCAACGACGATCTGCGCGTGCGCGTGGCCGCCTTGCACGCCTGGCGCGACCGCCGCGGCGGCGCGCCGCGCGGTGAGGTCGACGCCGGCGCGCTGGCCGCGATCGAGCAGGCCAGCAAGGGCTGGCGCAGACGTCTGGACGTCCGAACCGCGGCCACCGGCGTACCCGACAGCCACGCCGTGGGCGACCTGCTGGCGCACGCCTTCCCCGACCGCGTCGCCCATCGCGATGGCGACGATCCGCGCCGCTACGTGCTGGCCAACGGCCGCGGCGCCCGCCTGCACGAACACACGGCGCTGCTCGGCGAACCCTGGCTGGTGGTGACCGACCTGCGGCTGGAGTCGCGCGACAGCCTGGTGTTCAGCGCCGCGCCGCTGGACCCGCGCACGCTGGAGCGCGACTTCCCCGCGCATTTCACCTGCGAACGCACGCTGCGCTGGAACGAGCAGCGCGGCGCGGCCGAGGCGTTCGAGGAAAGCCGCTTCGGCGCCATCGTGCTGAGCCGCCACAGCGTGCCGGTGCGCCCGGCCGATGCCTTGCCGGCGATGCTGGCGGCGATCCGCGCGCGCGGCCTGGACGCGCTGCCGTGGAGCGACCACGCCCGCCGCCTGCGCGCGCGCATGCAGGCCTTGCGCGCATGGCTGCCCGAGCGTGGGCTGCCCGACGTGTCCGACGCAAACCTGCTGGTCACGCTGGAGCAGTGGCTGGCGCCGTACCTGCATGGCAAGCACCGACTCGACGCCCTGGGCGCGGAGGAGTTGTCGCAGGCGCTGGCGTCGCTGTTCGACCATTCGCAGCGCCAGCTGCTGGACGCCCAGGCACCGGAACAAGTCGTGGTGCCCAGCGGCCAGTCACGCCGGCTGGAATACGCCGATGCCGACTCGCCGGTGCTGGCCGTGAAACTGCAGGAACTGTTCGGCCTGGCCGACACTCCGCGCGTCGGCGGCGGCCGCATCCCGGTCACCCTGCACCTGCTCTCCCCCGCCGGCCGCCCGATCCAGGTCACCCAGGACCTGCGCGGCTTCTGGGAACGCACCTACCCCGAGGTGAAAAAGGAACTCAAGGGCCGCTACCCCCGCCACCCCTGGCCCGACGATCCATGGACGGCGCAGGCCACGCATCGGGCCAAGCCGCGGGGAAGGTGA
PROTEIN sequence
Length: 878
MQRMTAPDFPILPLLPEIRAALAANPRLVLEAPPGAGKTTQVPLALLDAPWLAGRRIVMLEPRRLAARAAAQFMATQLGEPVGQTVGYRIRFESKVSAATRVEVVTEGILTRLIQADPELAGIGAIIFDEFHERHLAGDLGAVLALDVQATLRPDLRLLLMSATLDGERIAGWLDAPRLSSPGRSFPIRIEHPPARAQESAEQHLARTVRQALDETDGDVLVFLPGRREIARTQALLERMLPSPFGGGVGGEGAVGAERPAPPVPSPAPKGSPSPGGRGEQIDIVPLHGELSLTEQQYALAPAEPGTRRIVLATNVAESSITLPGIRAVVDSGLAREPRFDPHSGFTRLETVTISQASADQRAGRAGRVAAGVAYRLWPQSRRLERSRGAEIAQAELSGLALELAAWGVTAADGGDLAWLDPPPPGALAQARELLQALDALDRDACITALGRRMLELGASPRLAAAALRAPHEQRAVVADLLALLEARSPLRGAQARNDDLRVRVAALHAWRDRRGGAPRGEVDAGALAAIEQASKGWRRRLDVRTAATGVPDSHAVGDLLAHAFPDRVAHRDGDDPRRYVLANGRGARLHEHTALLGEPWLVVTDLRLESRDSLVFSAAPLDPRTLERDFPAHFTCERTLRWNEQRGAAEAFEESRFGAIVLSRHSVPVRPADALPAMLAAIRARGLDALPWSDHARRLRARMQALRAWLPERGLPDVSDANLLVTLEQWLAPYLHGKHRLDALGAEELSQALASLFDHSQRQLLDAQAPEQVVVPSGQSRRLEYADADSPVLAVKLQELFGLADTPRVGGGRIPVTLHLLSPAGRPIQVTQDLRGFWERTYPEVKKELKGRYPRHPWPDDPWTAQATHRAKPRGR*