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scnpilot_solids1_trim150_scaffold_1072_15

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 10719..11624

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 295.0
  • Bit_score: 534
  • Evalue 5.60e-149
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94049.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 295.0
  • Bit_score: 534
  • Evalue 7.90e-149
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 296.0
  • Bit_score: 530
  • Evalue 2.60e-148
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCTCGACAACGTCACCATCAACCAGCTGCGTGCGTTCGTTGCGGTGTGCGACCAGGGCAGCTTCTCGGGTGCCGCGCGCAAGCTCGCGCGGGCGCAGTCGGCCATCAGCCACGCGATCAAGGCGCTGGAGAGTGCGTTCGACGTCGAGCTGTTCGAGCGCAACACGCGCAAGGCCCAGCTCACCGCGGCGGGGCGCAGCCTTCTGCCGGACGCCCGGGCGGTGATCTCGCGTACGGAGGAAATGAAGAACCGCGCCGGCGCGATCGCCAAGGCCGGCGTGCCGCAGGTATCGGTGGCGGTCGACGCCTACTTCCCGCGCGCCCACCTGGTCGACGGCTTGCGCACGCTGCAGGAAGAGTTTCCGACCGCCGCGATCAACCTGCGCATCACCACCATGCAGGGCGGCGAAAAGCTGGTGCTCGAAAAAGTGTGCGCGCTGGCCGTCACCATCAACGACGTGCCGGAAGTGAACCCGCAAGCCATCGAACGCCACTGGCTGCGCGAGGAGGAGATGGTGACGGTATGCGCGCCGTCCTATCAGCTCGCTTCGACACCCAAACCCATCCCGGTGGACGAGTTTGGCCGATACATACAGGTCATCGTCACGGACAACCAGCCCGGCGCCGAAGAGAGCCAGCAGGGTGTAGCCGGCAAGCGCCAGTGGCTGGTCAACGACCTGGGCGCCAAACGCGACCTGCTCAAGGCCGGCCTCGGCTGGGGACACTTGCCACGGCACCTGGTCAGCGAGGATCTGGCAAGCGGAGCGCTCGTCGAGCTTGAGCGTCGCGCCTGGCACATGGGCCCGCTGACGTTCGTGATCTCGCAGCGCCGGGGTCACGATTTCTCGCCGTGCGAGTTGCGGCTGATCGAGTTGCTCGGGAAACCTCGGCGTTCGCTCGTTTGA
PROTEIN sequence
Length: 302
MLDNVTINQLRAFVAVCDQGSFSGAARKLARAQSAISHAIKALESAFDVELFERNTRKAQLTAAGRSLLPDARAVISRTEEMKNRAGAIAKAGVPQVSVAVDAYFPRAHLVDGLRTLQEEFPTAAINLRITTMQGGEKLVLEKVCALAVTINDVPEVNPQAIERHWLREEEMVTVCAPSYQLASTPKPIPVDEFGRYIQVIVTDNQPGAEESQQGVAGKRQWLVNDLGAKRDLLKAGLGWGHLPRHLVSEDLASGALVELERRAWHMGPLTFVISQRRGHDFSPCELRLIELLGKPRRSLV*