ggKbase home page

scnpilot_solids1_trim150_scaffold_2772_5

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_64_96

partial RP 5 / 55 BSCG 5 / 51 ASCG 6 / 38
Location: comp(3844..4830)

Top 3 Functional Annotations

Value Algorithm Source
cynR; DNA-binding transcriptional regulator CynR; K11921 LysR family transcriptional regulator id=12494724 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 329.0
  • Bit_score: 649
  • Evalue 1.70e-183
  • rbh
cynR; DNA-binding transcriptional regulator CynR; K11921 LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 290.0
  • Bit_score: 301
  • Evalue 3.60e-79
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 328.0
  • Bit_score: 549
  • Evalue 4.40e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGCAACGCAATCTCGTCTTCCCGCGCTCCATTCGCTACCTGATCGCGGTCGCGGATATGCAAAGCTTCACGCGAGCCGCGGAATTCCTGTGCGTGTCGCAGCCCACGTTATCGCAGCAGATCAAGAATCTGGAAGACCTTCTTGACGTGCAGCTGCTGGACCGGTCCGGACGATCGATCCAGTTGACCGCTGCGGGAGAGGTCTATCTGCACTATGCCCGTCGCGCCCTGCGGGAGCTGGACGAAGGGAAGCGCGCCATTCATGAACTGCAGGACCTGAGCCGCGGCTCGCTCCGTCTGGGGATGACGCCGATTACCGACCATCTGGTCAGCCCCTTGCTCGAATCCTTCAACACCCGCTATCCCGATATCACCGTCAGCACACGGGAACTGCCGCAGGATGCCGTCGAGACCGAAGTGGCGGAAGGCAACCTCGATATCGGCATCGCCTTTACCAATGTGCTCTCGACCATCGCCCGGTCGAACGAGATCGACACGCATGTCCTGTTCGATGAAACGCTGGATCTTGCCGTAGGCAAGTCCCATCCCCGTGCCGGACAGACCGGCGCATTGACCCCCCAGATGCTGGAGAATGAGTCGCTGGTCCTGCTCAACACCGATTTTGCCCTGCGGCGTCACGTCGACCAGTACTGTCACGAGCAGGGCATCACGCCGCGTATCGCGATGGAAACCAATTCGCTCAGCGTCATTGTCGAAGTCGCCCGCCTGGGCCGGCTGGCCACCATCCTGCCCCACAGCATCATCTGCTCGCATCAAGGCCTCTATCCGTTGCCGCTGCAACCCGACATGCCTCATCACACGATTACCCTGATCTGTCGTAAATCAGGGTATAAAAGCCCCGCCTGCACGGCTTTCGGCGTACTGGCAACCCTCTGGAGCCCGCATCGGCCAGGCCAGAAACCGTTGGAGGCCCATACCGACTCCGGCCTCGAATCGAAATCGGGATCCGTCACTTCCGTGCAGTGA
PROTEIN sequence
Length: 329
MQRNLVFPRSIRYLIAVADMQSFTRAAEFLCVSQPTLSQQIKNLEDLLDVQLLDRSGRSIQLTAAGEVYLHYARRALRELDEGKRAIHELQDLSRGSLRLGMTPITDHLVSPLLESFNTRYPDITVSTRELPQDAVETEVAEGNLDIGIAFTNVLSTIARSNEIDTHVLFDETLDLAVGKSHPRAGQTGALTPQMLENESLVLLNTDFALRRHVDQYCHEQGITPRIAMETNSLSVIVEVARLGRLATILPHSIICSHQGLYPLPLQPDMPHHTITLICRKSGYKSPACTAFGVLATLWSPHRPGQKPLEAHTDSGLESKSGSVTSVQ*