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scnpilot_solids2_trim150_scaffold_2493_1

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 1..375

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Vibrio campbellii HY01 RepID=A6ASH1_9VIBR similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 123.0
  • Bit_score: 143
  • Evalue 1.50e-31
Wzx {ECO:0000313|EMBL:CDH25624.1}; TaxID=1398204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. kraussei Becker Underwood.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 119.0
  • Bit_score: 144
  • Evalue 7.30e-32
lipopolysaccharide biosynthesis protein; K03328 polysaccharide transporter, PST family similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 123.0
  • Bit_score: 139
  • Evalue 5.30e-31

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Taxonomy

Xenorhabdus bovienii → Xenorhabdus → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
TATAAAATGATACTTCCGGTAGTGGGCGCCCTTTCTTTATCAATTTGGTTTTTGAAGGACTTTATCATCCACATCTTATTTACTCCCGATTTTACAGGAATGAGAGGTTTATTTGCCTTTCAGTTGATAGGTGATTTCCTGAAAATAGGAAGTTGGTTACTTGCCTATCTGATGCTGGCCAAGGCAATGACAAAGACCTTCATTGTTACGGAAATCCTGTTCGGAATAAGCTTTGTTATATTCTCTTACATTTTTATCAACCGTTACGGTGTCGTTGGCGCCACCTATGCCTTTGCACTTAATTACCTGATTTATTGGATTGTAATGGAAGTAATAGCCAAAAAATACCTGAATGAGGAAAGCCAGACAAAATAA
PROTEIN sequence
Length: 125
YKMILPVVGALSLSIWFLKDFIIHILFTPDFTGMRGLFAFQLIGDFLKIGSWLLAYLMLAKAMTKTFIVTEILFGISFVIFSYIFINRYGVVGATYAFALNYLIYWIVMEVIAKKYLNEESQTK*