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scnpilot_solids2_trim150_scaffold_31909_2

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 706..1434

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic protein involved in polysaccharide export n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGB7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 243.0
  • Bit_score: 161
  • Evalue 8.00e-37
polysaccharide export periplasmic protein; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 243.0
  • Bit_score: 161
  • Evalue 2.50e-37
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:ACU59849.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 243.0
  • Bit_score: 161
  • Evalue 1.10e-36

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 729
ATGCTGTTGCTGGGTGGATGGTTTCTTTGCCTTCAAACATCCTGCAACACTGCAAAGCATTCCACCTATTTTCAGGATATGCTCCGCGATACCACACTGGCCAACCTGGTGAGGCACCCCGTGGAAACCACCATTGCTCCCGGCGACCTTTTGTCGATTACTGTGGCGAGCCTCAGCCCGGAAAATACGGCTCTCTACAATGTGGCTCCCGACGGAGTGGATGGATTGAAAGGTTACATGGTGGATAAGAACGGGGATATCAACTTCATCAAACTGGGCAAGGTTCATGCAGCCGGCCTTACTAAAGTAGCATTGAGCAATCAACTGCAAAAAGACCTGGAACCTTATTTATCGCAAAATGTGGTCACGGTCGATATTCAAAACCGGCACATCACCATGATGGGTGCGGTGAGTACCAAAGTATTGCCACTGACAGATAAAATGACCCTGCTGGATGCGCTGGCATCATCGGGCGATATCGGCGCAAAGGGGAAAGCTGATAATATCCTGTTGATCCGTGAAGCCGATTCTACCGGCAGCCAAAAAACTTTTCAGAGATTGAACCTGACCGATCTTTCTATTTTTTATTCTCCGTATTTTTATCTGAAGCCGAATGACATTGTTTATGTGGAACCGGCGAAACCAAAGATGACAGCAGTTACCATTATTTCATTGGTTGTTTCAACTACTTCATTTATCTTTCTTTTAATTGACCGAATATTCAGGTAA
PROTEIN sequence
Length: 243
MLLLGGWFLCLQTSCNTAKHSTYFQDMLRDTTLANLVRHPVETTIAPGDLLSITVASLSPENTALYNVAPDGVDGLKGYMVDKNGDINFIKLGKVHAAGLTKVALSNQLQKDLEPYLSQNVVTVDIQNRHITMMGAVSTKVLPLTDKMTLLDALASSGDIGAKGKADNILLIREADSTGSQKTFQRLNLTDLSIFYSPYFYLKPNDIVYVEPAKPKMTAVTIISLVVSTTSFIFLLIDRIFR*