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scnpilot_solids2_trim150_scaffold_82

Search features with annotation key words

Displaying items 91-120 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_82_90
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92120..95389)
-----------------
DNA (3270bp)
protein (1090aa)
Type I site-specific deoxyribonuclease, HsdR family; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3N3_POLGS rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:EXL08889.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids2_trim150_scaffold_82_91
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95517..96266)
-----------------
DNA (750bp)
protein (250aa)
Putative uncharacterized protein id=2777526 bin=GWF2_Geobacter_54_21 species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_solids2_trim150_scaffold_82_92
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96263..97453)
-----------------
DNA (1191bp)
protein (397aa)
Restriction endonuclease S subunits (modular protein); K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Type I restriction-modification system specificity subunit n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZTI7_PSEAC
Type I restriction-modification system specificity subunit {ECO:0000313|EMBL:AHJ62540.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
scnpilot_solids2_trim150_scaffold_82_93
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97450..98475)
-----------------
DNA (1026bp)
protein (342aa)
Putative DNA-binding protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A557_STAND rbh
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EXL08886.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
DNA-binding protein rbh
scnpilot_solids2_trim150_scaffold_82_94
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98468..99985)
-----------------
DNA (1518bp)
protein (506aa)
Type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
Type I restriction-modification system, M subunit n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D4J4_9RHOB rbh
Type I restriction-modification protein subunit M {ECO:0000313|EMBL:KGJ23577.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
scnpilot_solids2_trim150_scaffold_82_95
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99985..100569)
-----------------
DNA (585bp)
protein (195aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A559_STAND
Uncharacterized protein {ECO:0000313|EMBL:EZQ16082.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_96
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100626..101279)
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F500CD rbh
Iron-dependent repressor IdeR {ECO:0000313|EMBL:KJL24115.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Mn-dependent transcriptional regulator; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
scnpilot_solids2_trim150_scaffold_82_97
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101283..101609)
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F5E488
Uncharacterized protein {ECO:0000313|EMBL:KJL25799.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_82_98
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101635..102837)
-----------------
DNA (1203bp)
protein (401aa)
manganese transporter n=1 Tax=Microbacterium barkeri RepID=UPI0002F4B928 rbh
Divalent metal cation transporter MntH {ECO:0000313|EMBL:KJQ55251.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
mntH; Mn2+ and Fe2+ transporters of the NRAMP family; K03322 manganese transport protein rbh
scnpilot_solids2_trim150_scaffold_82_99
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103073..103690
-----------------
DNA (618bp)
protein (206aa)
rRNA methyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002F2A863 rbh
rRNA methyltransferase {ECO:0000313|EMBL:KDA06796.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
rRNA methylase rbh
scnpilot_solids2_trim150_scaffold_82_100
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103709..104182)
-----------------
DNA (474bp)
protein (158aa)
UPI0003C7EAEA related cluster n=1 Tax=unknown RepID=UPI0003C7EAEA
Uncharacterized protein {ECO:0000313|EMBL:KJL29145.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_82_101
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

104385..106100
-----------------
DNA (1716bp)
protein (572aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4N5_9MICO rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KDA07096.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
acyl-CoA dehydrogenase
scnpilot_solids2_trim150_scaffold_82_102
unknown

Not on your lists

comp(106104..106505)
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_82_103
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(106572..107906)
-----------------
DNA (1335bp)
protein (445aa)
multidrug transporter MatE n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CA0F1 rbh
Na+-driven multidrug efflux pump rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_82_104
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107923..108414
-----------------
DNA (492bp)
protein (164aa)
fructose transporter n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI000370523D
Dephospho-CoA kinase {ECO:0000313|EMBL:CEA07754.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_105
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108478..109959)
-----------------
DNA (1482bp)
protein (494aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E2B836 rbh
HNH endonuclease {ECO:0000313|EMBL:KJL21495.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
HNH endonuclease
scnpilot_solids2_trim150_scaffold_82_106
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110141..110815
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L1A5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL24121.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_107
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111519..111953
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377B4F9
Putative Methylation {ECO:0000313|EMBL:CDK01036.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
general secretion pathway protein H
scnpilot_solids2_trim150_scaffold_82_108
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

112042..112443
-----------------
DNA (402bp)
protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF24328.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
scnpilot_solids2_trim150_scaffold_82_109
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112440..113048
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK01039.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
scnpilot_solids2_trim150_scaffold_82_110
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113039..114826
-----------------
DNA (1788bp)
protein (596aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6V7_CELGA
Uncharacterized protein {ECO:0000313|EMBL:CDK01038.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_111
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

114823..115692
-----------------
DNA (870bp)
protein (290aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
prepilin signal peptidase PulO-like peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003693AAA rbh
scnpilot_solids2_trim150_scaffold_82_112
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

115722..116804
-----------------
DNA (1083bp)
protein (361aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377EB55 rbh
Competence protein A {ECO:0000313|EMBL:KJL34294.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM
scnpilot_solids2_trim150_scaffold_82_113
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

116801..117484
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036456A0
Uncharacterized protein {ECO:0000313|EMBL:KJL34293.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_82_114
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117481..118245
-----------------
DNA (765bp)
protein (255aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372FA36
Uncharacterized protein {ECO:0000313|EMBL:KJL25817.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_82_115
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118242..119381
-----------------
DNA (1140bp)
protein (380aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E50BC rbh
Twitching mobility protein {ECO:0000313|EMBL:KJL25818.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
pilus retraction protein PilT; K02669 twitching motility protein PilT
scnpilot_solids2_trim150_scaffold_82_116
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

119381..120619
-----------------
DNA (1239bp)
protein (413aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037E9920 rbh
Type II secretion system protein F {ECO:0000313|EMBL:KJL34290.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
type II secretory pathway, component PulF; K02653 type IV pilus assembly protein PilC rbh
scnpilot_solids2_trim150_scaffold_82_117
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(120690..122366)
-----------------
DNA (1677bp)
protein (559aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037AC5CB rbh
Type II secretion system protein E {ECO:0000313|EMBL:KJL25820.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
type II secretion system protein E; K02652 type IV pilus assembly protein PilB rbh
scnpilot_solids2_trim150_scaffold_82_118
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

122539..124503
-----------------
DNA (1965bp)
protein (655aa)
Neutral endopeptidase {ECO:0000313|EMBL:KJL25822.1}; EC=3.4.24.- {ECO:0000313|EMBL:KJL25822.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
metalloendopeptidase; K07386 putative endopeptidase [EC:3.4.24.-] rbh
Peptidase M13 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L1A9_9MICO rbh
scnpilot_solids2_trim150_scaffold_82_119
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

124620..125579
-----------------
DNA (960bp)
protein (320aa)
beta-lactamase class A; K01467 beta-lactamase [EC:3.5.2.6] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003092FA6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL30389.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Displaying items 91-120 of 252 in total

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