| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
|
scnpilot_solids2_trim150_scaffold_82_180
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(184851..185186)
----------------- DNA (336bp) protein (112aa) |
PadR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364EAB2
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EFQ82909.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
PadR family transcripitonal regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR
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scnpilot_solids2_trim150_scaffold_82_181
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
185327..185998
----------------- DNA (672bp) protein (224aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349F91D
rbh
Putative HTH-type transcriptional regulator YdfH {ECO:0000313|EMBL:KJL31532.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator
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scnpilot_solids2_trim150_scaffold_82_182
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
185995..187545
----------------- DNA (1551bp) protein (517aa) |
2-methylcitrate dehydratase n=1 Tax=Microbacterium barkeri RepID=UPI000314D182
rbh
2-methylcitrate dehydratase {ECO:0000313|EMBL:EYT60278.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
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scnpilot_solids2_trim150_scaffold_82_183
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
187545..188447
----------------- DNA (903bp) protein (301aa) |
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
2-methylisocitrate lyase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036DD17F
rbh
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scnpilot_solids2_trim150_scaffold_82_184
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
188451..189644
----------------- DNA (1194bp) protein (398aa) |
citrate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D3640
rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
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scnpilot_solids2_trim150_scaffold_82_185
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(189678..191525)
----------------- DNA (1848bp) protein (616aa) |
Non-reducing end beta-L-arabinofuranosidase {ECO:0000313|EMBL:KJL23023.1}; EC=3.2.1.185 {ECO:0000313|EMBL:KJL23023.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Uncharacterized protein conserved in bacteria n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N8G4_MICTS
rbh
hypothetical protein; K09955 hypothetical protein
rbh
|
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scnpilot_solids2_trim150_scaffold_82_186
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(191529..192422)
----------------- DNA (894bp) protein (298aa) |
ABC-type sugar transport system, permease component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N8G3_MICTS
rbh
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJL23024.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
rbh
|
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scnpilot_solids2_trim150_scaffold_82_187
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(192435..192692)
----------------- DNA (258bp) protein (86aa) |
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036C317B
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89234.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein
|
|
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scnpilot_solids2_trim150_scaffold_82_188
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(192704..193549)
----------------- DNA (846bp) protein (282aa) |
UDP-glucose 4-epimerase n=1 Tax=Microbacterium barkeri RepID=UPI00037C1876
rbh
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89237.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
galE; nucleoside-diphosphate-sugar epimerase
rbh
|
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scnpilot_solids2_trim150_scaffold_82_189
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(193597..195120)
----------------- DNA (1524bp) protein (508aa) |
alpha-L-arabinofuranosidase domain-containing protein; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
rbh
alpha-N-arabinofuranosidase n=1 Tax=Microbacterium barkeri RepID=UPI0003022FE9
rbh
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89221.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
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scnpilot_solids2_trim150_scaffold_82_190
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(195151..196065)
----------------- DNA (915bp) protein (305aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00035FAD1D
rbh
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:KJL31538.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
rbh
|
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scnpilot_solids2_trim150_scaffold_82_191
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(196065..197006)
----------------- DNA (942bp) protein (314aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E4645A
rbh
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:KJL31539.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
rbh
|
|
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scnpilot_solids2_trim150_scaffold_82_192
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(197006..198340)
----------------- DNA (1335bp) protein (445aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D81B10
rbh
Maltose ABC transporter periplasmic protein {ECO:0000313|EMBL:KJL31540.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
putative L-arabinose ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein
rbh
|
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scnpilot_solids2_trim150_scaffold_82_193
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
comp(198428..199444)
----------------- DNA (1017bp) protein (339aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DE2191
rbh
LacI family transcriptional regulator
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
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scnpilot_solids2_trim150_scaffold_82_194
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
199541..199789
----------------- DNA (249bp) protein (83aa) |
Antitoxin VapB43 {ECO:0000313|EMBL:KJQ53726.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
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scnpilot_solids2_trim150_scaffold_82_195
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
199786..200214
----------------- DNA (429bp) protein (143aa) |
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Ribonuclease VapC n=1 Tax=Mycobacterium canettii CIPT 140070017 RepID=L0QZU1_9MYCO
hypothetical protein
|
|
|
scnpilot_solids2_trim150_scaffold_82_196
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
200249..201271
----------------- DNA (1023bp) protein (341aa) |
LacI family transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B4272D
rbh
Lactose operon repressor {ECO:0000313|EMBL:KJQ55147.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
LacI family transcriptional regulator
|
|
|
scnpilot_solids2_trim150_scaffold_82_197
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
201489..202205
----------------- DNA (717bp) protein (239aa) |
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:KJL23030.1}; EC=5.1.3.4 {ECO:0000313|EMBL:KJL23030.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Microbacterium barkeri RepID=UPI00030DB002
rbh
|
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scnpilot_solids2_trim150_scaffold_82_198
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
202202..203776
----------------- DNA (1575bp) protein (525aa) |
Ribulokinase {ECO:0000313|EMBL:KJL31546.1}; EC=2.7.1.16 {ECO:0000313|EMBL:KJL31546.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Sugar (Pentulose and hexulose) kinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YLI7_9MICO
rbh
araB; sugar (pentulose and hexulose) kinase
rbh
|
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scnpilot_solids2_trim150_scaffold_82_199
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
203788..205305
----------------- DNA (1518bp) protein (506aa) |
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
arabinose isomerase n=1 Tax=Microbacterium barkeri RepID=UPI00030EAA2E
rbh
|
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scnpilot_solids2_trim150_scaffold_82_200
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(205653..206945)
----------------- DNA (1293bp) protein (431aa) |
Xylulose kinase {ECO:0000313|EMBL:KJQ55142.1}; EC=2.7.1.17 {ECO:0000313|EMBL:KJQ55142.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
xylulokinase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036ED1F9
rbh
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scnpilot_solids2_trim150_scaffold_82_201
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(207097..208287)
----------------- DNA (1191bp) protein (397aa) |
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
xylose isomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003627AC4
rbh
|
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scnpilot_solids2_trim150_scaffold_82_202
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(208381..209376)
----------------- DNA (996bp) protein (332aa) |
LacI family transcriptional regulator n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B5B205
rbh
HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:KJL33800.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
rbh
|
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scnpilot_solids2_trim150_scaffold_82_203
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
209520..210815
----------------- DNA (1296bp) protein (432aa) |
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YZN4_9BACI
rbh
Multiple sugar-binding protein {ECO:0000313|EMBL:KJL33801.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
rbh
|
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scnpilot_solids2_trim150_scaffold_82_204
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
210823..211839
----------------- DNA (1017bp) protein (339aa) |
sugar ABC transporter permease n=1 Tax=Promicromonospora sukumoe RepID=UPI0003771A31
rbh
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:KJL33802.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
rbh
|
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scnpilot_solids2_trim150_scaffold_82_205
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
211836..212732
----------------- DNA (897bp) protein (299aa) |
thiamine ABC transporter ATP-binding protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B33FDF
rbh
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJL33803.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative ABC transporter permease; K02026 multiple sugar transport system permease protein
rbh
|
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scnpilot_solids2_trim150_scaffold_82_206
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
212729..215149
----------------- DNA (2421bp) protein (807aa) |
Periplasmic beta-glucosidase {ECO:0000313|EMBL:KJL33804.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KJL33804.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
beta-glucosidase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00038113F9
rbh
|
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scnpilot_solids2_trim150_scaffold_82_207
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
215146..216720
----------------- DNA (1575bp) protein (525aa) |
Beta-xylosidase {ECO:0000313|EMBL:KJL21954.1}; EC=3.2.1.37 {ECO:0000313|EMBL:KJL21954.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
alpha-N-arabinofuranosidase (EC:3.2.1.55); K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37]; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
rbh
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003827369
rbh
|
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scnpilot_solids2_trim150_scaffold_82_208
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
216717..217871
----------------- DNA (1155bp) protein (385aa) |
transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B3C712
rbh
N-acetylglucosamine repressor {ECO:0000313|EMBL:KJL33806.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator/sugar kinase
rbh
|
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scnpilot_solids2_trim150_scaffold_82_209
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
217899..219146
----------------- DNA (1248bp) protein (416aa) |
Putative xylitol oxidase {ECO:0000313|EMBL:KJQ55149.1}; EC=1.1.3.41 {ECO:0000313|EMBL:KJQ55149.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E51B7C
rbh
fad linked oxidase domain-containing protein
rbh
|